RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 SPANXA1Q9NS26 97 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 WDR87Q6ZQQ6 2873 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 RPLP1P05386 114 aaKnown RBP5.12□□□□□ -1.59
PRKDC-202ENST00000338368 ZNF726P1Q15940 193 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 SAPCD1Q5SSQ6 148 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 DIAPH2-AS1Q14236 149 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 VMO1Q7Z5L0 202 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 TMEM183AQ8IXX5 376 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 MRPS16Q9Y3D3 137 aaKnown RBP5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIVEP2P31629 2446 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST1H2BKO60814 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST1H2BJP06899 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST1H2BOP23527 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST1H2BBP33778 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST1H2BDP58876 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST1H2BCP62807 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST2H2BEQ16778 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST1H2BHQ93079 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST1H2BNQ99877 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 HIST1H2BMQ99879 126 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 PGLYRP4Q96LB8 373 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 METTL26Q96S19 204 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
PRKDC-202ENST00000338368 TRAV9-1A0A075B6T8 112 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 DLX6P56179 175 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 GNG5P63218 68 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 PSMG4Q5JS54 123 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 FNDC10F2Z333 226 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 HNRNPA3P51991 378 aaKnown RBP5.11□□□□□ -1.59
PRKDC-202ENST00000338368 FOXA3P55318 350 aaPredicted RBP5.11□□□□□ -1.59
PRKDC-202ENST00000338368 TSPOP30536 169 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 C5orf52A6NGY3 159 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 AMY1AP04745 511 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 CLEC19AQ6UXS0 136 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 F11RQ9Y624 299 aaKnown RBP5.11□□□□□ -1.59
PRKDC-202ENST00000338368 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.11□□□□□ -1.59
PRKDC-202ENST00000338368 OOSP1A8MZH6 123 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 M0R1W7 72 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 POU2AF1Q16633 256 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 SPANXN1Q5VSR9 72 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 C8orf46Q8TAG6 207 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 Q9H3A6 140 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 NDUFA4L2Q9NRX3 87 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 TRBV9A0A0B4J1U6 114 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 FBLL1A6NHQ2 334 aaKnown RBP5.11□□□□□ -1.59
PRKDC-202ENST00000338368 PRSS1P07477 247 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 OR2T8A6NH00 312 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 DIRC3C9JPN6 131 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 LEPROTL1O95214 131 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 FAM71F2Q6NXP2 309 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 BEND2Q8NDZ0 799 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 OR4C5Q8NGB2 326 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 A0A1B0GWJ7 208 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 Q6ZPA2 131 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 TMEM170AQ8WVE7 144 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 F5H697 171 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 TFPI2P48307 235 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 RRN3P1Q2M238 152 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 ZNF833PQ6ZTB9 187 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 RELQ04864 619 aaPredicted RBP5.11□□□□□ -1.59
PRKDC-202ENST00000338368 TWIST1Q15672 202 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 OR10J6PQ8NGY7 276 aa5.11□□□□□ -1.59
PRKDC-202ENST00000338368 TGFAP01135 160 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 ATG101Q9BSB4 218 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 CTSZQ9UBR2 303 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 TRGV3P03979 118 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 CDC42EP3Q9UKI2 254 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 IGHV3-49A0A0A0MS15 119 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 A6NDN8 102 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 PRTN3P24158 256 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 LYPD6BQ8NI32 183 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 FAM106AQ4KMX7 169 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 MINOS1Q5TGZ0 78 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 LINC00311Q8N616 119 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 KAAG1Q9UBP8 84 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 MINOS1-NBL1R4GNA1 71 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 RHOGP84095 191 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 LHFPL4Q7Z7J7 247 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 LURAP1LQ8IV03 231 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 OR4B1Q8NGF8 309 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 PAM16Q9Y3D7 125 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 SRRM4A7MD48 611 aaKnown RBP5.1□□□□□ -1.59
PRKDC-202ENST00000338368 SYT8Q8NBV8 401 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 NEU1Q99519 415 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 GSX1Q9H4S2 264 aaPredicted RBP5.1□□□□□ -1.59
PRKDC-202ENST00000338368 TMEM14BQ9NUH8 114 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 C9JCJ5 164 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 LHBP01229 141 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 DLX1P56177 255 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 MAP1LC3CQ9BXW4 147 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 PTPRSQ13332 1948 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 FMC1Q96HJ9 113 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 VCX2Q9H322 139 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 OTORQ9NRC9 128 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 UFC1Q9Y3C8 167 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 TCF23Q7RTU1 214 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 VPS25Q9BRG1 176 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 BPESC1Q9GZL8 116 aa5.1□□□□□ -1.59
PRKDC-202ENST00000338368 LINC00527Q9UJ94 153 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms