RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 KBTBD11-OT1A0A1B0GTJ5 212 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 PSMB11A5LHX3 300 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 LCN12Q6JVE5 192 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 COMMD5Q9GZQ3 224 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 C20orf202A1L168 122 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 NDUFB3O43676 98 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 KLF5Q13887 457 aaPredicted RBP12.8□□□□□ -0.36
USH1C-202ENST00000318024 PMCHL1Q16048 86 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 EBLN2Q6P2I7 272 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 CLEC2AQ6UVW9 174 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 FAM167A-AS1Q96KT0 104 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 COX11Q9Y6N1 276 aa12.8□□□□□ -0.36
USH1C-202ENST00000318024 TNCP24821 2201 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 H0YJW9 148 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 K7EP13 123 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 CCL3L1P16619 93 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 UBE2V1Q13404 147 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 TNXAQ16473 311 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 LRRC10Q5BKY1 277 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 CT45A1Q5HYN5 189 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 OR8B3Q8NGG8 313 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 CT45A3Q8NHU0 189 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 OR8B2Q96RD0 313 aa12.79□□□□□ -0.36
USH1C-202ENST00000318024 C2orf70A6NJV1 201 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 CA1P00915 261 aaPredicted RBP12.78□□□□□ -0.36
USH1C-202ENST00000318024 USF1P22415 310 aaPredicted RBP12.78□□□□□ -0.36
USH1C-202ENST00000318024 GATA2P23769 480 aaPredicted RBP12.78□□□□□ -0.36
USH1C-202ENST00000318024 TMEM200BQ69YZ2 307 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 Q6ZVH6 145 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 FAM231DQ6ZW35 169 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 DTX2Q86UW9 622 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 SLC25A33Q9BSK2 321 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 C19orf24Q9BVV8 132 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 SLC35D1Q9NTN3 355 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 hADV38S2A0JD32 116 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 RTL8BQ17RB0 113 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 UNQ5815/PRO19632Q6UWF5 114 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 ATOH7Q8N100 152 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.78□□□□□ -0.36
USH1C-202ENST00000318024 CSMD2Q7Z408 3487 aa12.78□□□□□ -0.36
USH1C-202ENST00000318024 LOC105371242A0A075B767 164 aa12.77□□□□□ -0.36
USH1C-202ENST00000318024 TRAV9-2A0A087WT02 112 aa12.77□□□□□ -0.36
USH1C-202ENST00000318024 OR2J3O76001 311 aa12.77□□□□□ -0.36
USH1C-202ENST00000318024 SAA2P0DJI9 122 aaPredicted RBP12.77□□□□□ -0.36
USH1C-202ENST00000318024 PTTG1IPP53801 180 aa12.77□□□□□ -0.36
USH1C-202ENST00000318024 LEMD1Q68G75 181 aa12.77□□□□□ -0.36
USH1C-202ENST00000318024 BORCS7Q96B45 105 aa12.77□□□□□ -0.36
USH1C-202ENST00000318024 ZNRD1Q9P1U0 126 aa12.77□□□□□ -0.36
USH1C-202ENST00000318024 ZNF257Q9Y2Q1 563 aa12.77□□□□□ -0.36
USH1C-202ENST00000318024 TRAV34A0A0B4J273 112 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 IGLC7A0M8Q6 106 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 FAM181BA6NEQ2 426 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 OR7C2O60412 319 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 C8orf88P0DMB2 117 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 IGLL1P15814 213 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 NTF3P20783 257 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 HINT1P49773 126 aaPredicted RBP12.77□□□□□ -0.37
USH1C-202ENST00000318024 PRCDQ00LT1 54 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 MORN5Q5VZ52 161 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 SPATA12Q7Z6I5 190 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 OR51B2Q9Y5P1 312 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 LINC00312Q9Y6C7 94 aa12.77□□□□□ -0.37
USH1C-202ENST00000318024 A6NJY4 79 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 MGST1P10620 155 aaKnown RBP12.76□□□□□ -0.37
USH1C-202ENST00000318024 SRSF1Q07955 248 aaKnown RBP eCLIP12.76□□□□□ -0.37
USH1C-202ENST00000318024 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 URB1-AS1Q96HZ7 61 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 ALKBH7Q9BT30 221 aaPredicted RBP12.76□□□□□ -0.37
USH1C-202ENST00000318024 SLC25A2Q9BXI2 301 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 C7orf69Q9H7B7 122 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 ENY2Q9NPA8 101 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 ZNF331Q9NQX6 463 aaPredicted RBP12.76□□□□□ -0.37
USH1C-202ENST00000318024 TNFRSF19Q9NS68 423 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 KAAG1Q9UBP8 84 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 CIDEAO60543 219 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 TAS2R45P59539 299 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 MLANAQ16655 118 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 ASPHD1Q5U4P2 390 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 LYG1Q8N1E2 194 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 NUP35Q8NFH5 326 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 LINC00479Q96M42 142 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
USH1C-202ENST00000318024 BET1LQ9NYM9 111 aa12.76□□□□□ -0.37
USH1C-202ENST00000318024 FAM208BQ5VWN6 2430 aa12.75□□□□□ -0.37
USH1C-202ENST00000318024 CHD6Q8TD26 2715 aa12.75□□□□□ -0.37
USH1C-202ENST00000318024 UBR5O95071 2799 aaPredicted RBP12.75□□□□□ -0.37
USH1C-202ENST00000318024 VWC2LB2RUY7 222 aa12.75□□□□□ -0.37
USH1C-202ENST00000318024 OR9G1Q8NH87 305 aa12.75□□□□□ -0.37
USH1C-202ENST00000318024 NEU4Q8WWR8 484 aaPredicted RBP12.75□□□□□ -0.37
USH1C-202ENST00000318024 ZNF714Q96N38 554 aa12.75□□□□□ -0.37
USH1C-202ENST00000318024 GAL3ST2Q9H3Q3 398 aa12.75□□□□□ -0.37
USH1C-202ENST00000318024 SERTAD4Q9NUC0 356 aa12.75□□□□□ -0.37
USH1C-202ENST00000318024 PRNDQ9UKY0 176 aa12.75□□□□□ -0.37
USH1C-202ENST00000318024 A1L4Q6 167 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 J3QR06 171 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 UPK2O00526 184 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 FAM120AOSQ5T036 256 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 ZNF738Q8NE65 137 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 MRPL32Q9BYC8 188 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms