RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 THBS3P49746 956 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 SLC38A11Q08AI6 406 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 TMEM30BQ3MIR4 351 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 TMEM155Q4W5P6 130 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 TMEM14EPQ6UXP3 125 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 DTX2Q86UW9 622 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 VKORC1L1Q8N0U8 176 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-201ENST00000317677 C1RLQ9NZP8 487 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 FAM90A26D6RGX4 464 aa10.55□□□□□ -0.72
CPNE1-201ENST00000317677 IGFBP2P18065 325 aa10.55□□□□□ -0.72
CPNE1-201ENST00000317677 IER3P46695 156 aa10.55□□□□□ -0.72
CPNE1-201ENST00000317677 MPV17L2Q567V2 206 aa10.55□□□□□ -0.72
CPNE1-201ENST00000317677 SAMD13Q5VXD3 122 aa10.55□□□□□ -0.72
CPNE1-201ENST00000317677 TSKUQ8WUA8 353 aa10.55□□□□□ -0.72
CPNE1-201ENST00000317677 RAB1CQ92928 201 aa10.55□□□□□ -0.72
CPNE1-201ENST00000317677 CREBBPQ92793 2442 aa10.55□□□□□ -0.72
CPNE1-201ENST00000317677 TRAV3A0A0B4J244 114 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 A0A1B0GV72 72 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 FSTL3O95633 263 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 SMIM17P0DL12 118 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 CT45A6P0DMU7 189 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 CT45A5P0DMU8 189 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 CT45A7P0DMV0 189 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 UFSP1Q6NVU6 142 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 H2BFWTQ7Z2G1 175 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 OR8B3Q8NGG8 313 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 OR8B2Q96RD0 313 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 OR51B2Q9Y5P1 312 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 TRBV20OR9-2A0A075B6H5 130 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 SAP30O75446 220 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 HLA-DRB1P01911 266 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 COX6B1P14854 86 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 PMCHP20382 165 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 CD1BP29016 333 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 RPEL1Q2QD12 228 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 SPINK9Q5DT21 86 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 ZNF833PQ6ZTB9 187 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 NEGR1Q7Z3B1 354 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 OCC1Q8TAD7 63 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 S1PR3Q99500 378 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 TMEM147Q9BVK8 224 aa10.54□□□□□ -0.72
CPNE1-201ENST00000317677 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-201ENST00000317677 CRYBG3Q68DQ2 2970 aa10.53□□□□□ -0.72
CPNE1-201ENST00000317677 UBE2L5PA0A1B0GUS4 154 aa10.53□□□□□ -0.72
CPNE1-201ENST00000317677 HMGB3O15347 200 aaKnown RBP10.53□□□□□ -0.72
CPNE1-201ENST00000317677 DLX1P56177 255 aa10.53□□□□□ -0.72
CPNE1-201ENST00000317677 DIAPH2-AS1Q14236 149 aa10.53□□□□□ -0.72
CPNE1-201ENST00000317677 TMEM136Q6ZRR5 245 aa10.53□□□□□ -0.72
CPNE1-201ENST00000317677 WFDC12Q8WWY7 111 aa10.53□□□□□ -0.72
CPNE1-201ENST00000317677 RCHY1Q96PM5 261 aa10.53□□□□□ -0.72
CPNE1-201ENST00000317677 RAB1BQ9H0U4 201 aa10.53□□□□□ -0.72
CPNE1-201ENST00000317677 MALRD1Q5VYJ5 2156 aa10.53□□□□□ -0.72
CPNE1-201ENST00000317677 CELSR2Q9HCU4 2923 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 ABCA12Q86UK0 2595 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 NDUFS7O75251 213 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 NUDT3O95989 172 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 OR10J4P0C629 311 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 CX3CL1P78423 397 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 RELBQ01201 579 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 TMEM95Q3KNT9 176 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 MMD2Q8IY49 270 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 WASHC3Q9Y3C0 194 aa10.52□□□□□ -0.72
CPNE1-201ENST00000317677 PMS2P5A8MQ11 134 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 C9JCJ5 164 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 PPIAL4GP0DN37 164 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 KIR2DS2P43631 304 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 PRB3Q04118 309 aaPredicted RBP10.52□□□□□ -0.73
CPNE1-201ENST00000317677 VWC2Q2TAL6 325 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 SPANXN5Q5MJ07 72 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 MRPL54Q6P161 138 aaKnown RBP10.52□□□□□ -0.73
CPNE1-201ENST00000317677 GTF2H5Q6ZYL4 71 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 OR1B1Q8NGR6 318 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 DERL1Q9BUN8 251 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 MRPL20Q9BYC9 149 aaKnown RBP10.52□□□□□ -0.73
CPNE1-201ENST00000317677 TMEM140Q9NV12 185 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 NAT8BQ9UHF3 227 aa10.52□□□□□ -0.73
CPNE1-201ENST00000317677 HLA-DQA1P01909 254 aa10.51□□□□□ -0.73
CPNE1-201ENST00000317677 IGHV1-8P0DP01 117 aa10.51□□□□□ -0.73
CPNE1-201ENST00000317677 GPR6P46095 362 aaPredicted RBP10.51□□□□□ -0.73
CPNE1-201ENST00000317677 SCGB2A2Q13296 93 aa10.51□□□□□ -0.73
CPNE1-201ENST00000317677 LINC00311Q8N616 119 aa10.51□□□□□ -0.73
CPNE1-201ENST00000317677 ARHGAP32A7KAX9 2087 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 TRAV8-6A0A0B4J262 113 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 GAGE10A6NGK3 116 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 FAM90A9PA6NNJ1 464 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 SRRM4A7MD48 611 aaKnown RBP10.5□□□□□ -0.73
CPNE1-201ENST00000317677 CRXO43186 299 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-201ENST00000317677 IGKV1-16P04430 117 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 ATP5G3P48201 142 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 LCN12Q6JVE5 192 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 ATOH7Q8N100 152 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 NEU4Q8WWR8 484 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-201ENST00000317677 ST6GALNAC6Q969X2 333 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 ADTRPQ96IZ2 230 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 COMMD5Q9GZQ3 224 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 UBTD1Q9HAC8 227 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 MYO9AB2RTY4 2548 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms