RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 C3orf79P0CE67 100 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 A0A1B0GV72 72 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 CD59P13987 128 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 OR5AN1Q8NGI8 311 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 PROK2Q9HC23 129 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 SLC25A15Q9Y619 301 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 SPCS1Q9Y6A9 102 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 NOTCH3Q9UM47 2321 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 IGHV3-49A0A0A0MS15 119 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 PPBPP02775 128 aa11.42□□□□□ -0.58
ZNF541-202ENST00000314121 SLC25A48Q6ZT89 311 aaKnown RBP11.42□□□□□ -0.58
ZNF541-202ENST00000314121 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.41□□□□□ -0.58
ZNF541-202ENST00000314121 M0R381 172 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 LMO1P25800 156 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 TMEM190Q8WZ59 177 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 C5orf30Q96GV9 206 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 MRPL27Q9P0M9 148 aaKnown RBP11.41□□□□□ -0.58
ZNF541-202ENST00000314121 MED13LQ71F56 2210 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
ZNF541-202ENST00000314121 FAM159AQ6UWV7 190 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 MRPL52Q86TS9 123 aaKnown RBP11.41□□□□□ -0.58
ZNF541-202ENST00000314121 IGKV1D-17A0A075B6S4 117 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 IGKV1-39P01597 117 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 IGKV1D-39P04432 117 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 RNASE6Q93091 150 aaKnown RBP11.41□□□□□ -0.58
ZNF541-202ENST00000314121 ASCL2Q99929 193 aa11.41□□□□□ -0.58
ZNF541-202ENST00000314121 IGHV3OR16-8A0A075B7F1 116 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 H7C2G1 150 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 TYMSP04818 313 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 ZNF726P1Q15940 193 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 ABHD17AQ96GS6 310 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 MS4A6AQ9H2W1 248 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 PAPPA-AS1Q5QFB9 102 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 DYNLRB2Q8TF09 96 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 NEU4Q8WWR8 484 aaPredicted RBP11.4□□□□□ -0.58
ZNF541-202ENST00000314121 RAXQ9Y2V3 346 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 CACNA1BQ00975 2339 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 FAM181BA6NEQ2 426 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 TSPOP30536 169 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 TMPRSS3P57727 454 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 PRSS8Q16651 343 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 OR4X2Q8NGF9 303 aa11.4□□□□□ -0.58
ZNF541-202ENST00000314121 H3BUT2 72 aa11.4□□□□□ -0.59
ZNF541-202ENST00000314121 EREGO14944 169 aa11.4□□□□□ -0.59
ZNF541-202ENST00000314121 IGKV3-15P01624 115 aa11.4□□□□□ -0.59
ZNF541-202ENST00000314121 LYPD6Q86Y78 171 aa11.4□□□□□ -0.59
ZNF541-202ENST00000314121 TCRAP04437 139 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 Q0VG73 95 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 LCN12Q6JVE5 192 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 NUP35Q8NFH5 326 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 SCGB3A1Q96QR1 104 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 NXT2Q9NPJ8 142 aaKnown RBP11.39□□□□□ -0.59
ZNF541-202ENST00000314121 KLF2Q9Y5W3 355 aaPredicted RBP11.39□□□□□ -0.59
ZNF541-202ENST00000314121 ITGB1BP1O14713 200 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 TRGV9Q99603 122 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 TRGV3P03979 118 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 MYOD1P15172 320 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.39□□□□□ -0.59
ZNF541-202ENST00000314121 PSG1P11464 419 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 ASIPP42127 132 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 CACNG7P62955 275 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 SMAGPQ0VAQ4 97 aa11.39□□□□□ -0.59
ZNF541-202ENST00000314121 IGHV3-66A0A0C4DH42 116 aa11.38□□□□□ -0.59
ZNF541-202ENST00000314121 SEC11AP67812 179 aa11.38□□□□□ -0.59
ZNF541-202ENST00000314121 FAM74A4Q5TZK3 123 aa11.38□□□□□ -0.59
ZNF541-202ENST00000314121 IFI27L1Q96BM0 104 aa11.38□□□□□ -0.59
ZNF541-202ENST00000314121 SLC50A1Q9BRV3 221 aa11.38□□□□□ -0.59
ZNF541-202ENST00000314121 USF3Q68DE3 2245 aa11.38□□□□□ -0.59
ZNF541-202ENST00000314121 RNASE2P10153 161 aaKnown RBP11.38□□□□□ -0.59
ZNF541-202ENST00000314121 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
ZNF541-202ENST00000314121 DENND4CQ5VZ89 1909 aa11.38□□□□□ -0.59
ZNF541-202ENST00000314121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.38□□□□□ -0.59
ZNF541-202ENST00000314121 PMS2P5A8MQ11 134 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 LEPP41159 167 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 PRB3Q04118 309 aaPredicted RBP11.37□□□□□ -0.59
ZNF541-202ENST00000314121 TMEM200BQ69YZ2 307 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 ZNF256Q9Y2P7 627 aaPredicted RBP11.37□□□□□ -0.59
ZNF541-202ENST00000314121 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.37□□□□□ -0.59
ZNF541-202ENST00000314121 TIMM23O14925 209 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 ORAOV1Q8WV07 137 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 IGHG3P01860 377 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 Q8NFD4 153 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 JKAMPQ9P055 326 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 H0YJW9 148 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 ERVK11-1P61568 191 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 LY6EQ16553 131 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 MRPL16Q9NX20 251 aaKnown RBP11.37□□□□□ -0.59
ZNF541-202ENST00000314121 CRIM1Q9NZV1 1036 aa11.37□□□□□ -0.59
ZNF541-202ENST00000314121 ZNF56Q15929 161 aa11.36□□□□□ -0.59
ZNF541-202ENST00000314121 CLEC19AQ6UXS0 136 aa11.36□□□□□ -0.59
ZNF541-202ENST00000314121 DDB2Q92466 427 aa11.36□□□□□ -0.59
ZNF541-202ENST00000314121 SLC25A39Q9BZJ4 359 aaPredicted RBP11.36□□□□□ -0.59
ZNF541-202ENST00000314121 IGHV1-8P0DP01 117 aa11.36□□□□□ -0.59
ZNF541-202ENST00000314121 TDGF1P3P51864 188 aa11.36□□□□□ -0.59
ZNF541-202ENST00000314121 RNFT1Q5M7Z0 435 aa11.36□□□□□ -0.59
ZNF541-202ENST00000314121 OR2K2Q8NGT1 345 aa11.36□□□□□ -0.59
ZNF541-202ENST00000314121 POLR3KQ9Y2Y1 108 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms