RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ZNF664Q8N3J9 261 aa10.24□□□□□ -0.77
ABCA3-201ENST00000301732 ERCC8Q13216 396 aa10.24□□□□□ -0.77
ABCA3-201ENST00000301732 EIF4EBP2Q13542 120 aaPredicted RBP10.24□□□□□ -0.77
ABCA3-201ENST00000301732 SRSF7Q16629 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
ABCA3-201ENST00000301732 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
ABCA3-201ENST00000301732 LRP5O75197 1615 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 KIR3DS1Q14943 382 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 C2orf82Q6UX34 121 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 Q6ZT83 130 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 F8VVB4 439 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 F8VWA3 439 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 APOBEC3AP31941 199 aaPredicted RBP10.23□□□□□ -0.77
ABCA3-201ENST00000301732 METRNQ9UJH8 293 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 TIMM23O14925 209 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 C14orf178Q8N769 122 aaPredicted RBP10.23□□□□□ -0.77
ABCA3-201ENST00000301732 TMEM167AQ8TBQ9 72 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 JPT2Q9H910 190 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 TRAV12-1A0A0B4J245 112 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 MORN2Q502X0 79 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 ADAMTSL5Q6ZMM2 481 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 PAQR4Q8N4S7 273 aaPredicted RBP10.23□□□□□ -0.77
ABCA3-201ENST00000301732 TM2D1Q9BX74 207 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 OTORQ9NRC9 128 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 YAE1D1Q9NRH1 226 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 KNCNA6PVL3 124 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 ZNF329Q86UD4 541 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 C9JAW5 83 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 C3orf79P0CE67 100 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 OR9G4Q8NGQ1 327 aa10.23□□□□□ -0.77
ABCA3-201ENST00000301732 PINLYPA6NC86 204 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 BRD3OSQ6XYD6 125 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 ZNF688P0C7X2 276 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 LRRK1Q38SD2 2015 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 UPK2O00526 184 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 IGHMP01871 453 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 CRPP02741 224 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 ABHD17AQ96GS6 310 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 C1orf159Q96HA4 380 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 SFXN3Q9BWM7 321 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 PHF3Q92576 2039 aaKnown RBP10.22□□□□□ -0.77
ABCA3-201ENST00000301732 TRAV40A0A0B4J280 105 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 IGHV3-16A0A0C4DH30 117 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 FCN3O75636 299 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 NOTCH3Q9UM47 2321 aa10.22□□□□□ -0.77
ABCA3-201ENST00000301732 GAGE12BA1L429 117 aa10.21□□□□□ -0.77
ABCA3-201ENST00000301732 LILRA1O75019 489 aa10.21□□□□□ -0.77
ABCA3-201ENST00000301732 PLNP26678 52 aa10.21□□□□□ -0.77
ABCA3-201ENST00000301732 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
ABCA3-201ENST00000301732 OSR1Q8TAX0 266 aaPredicted RBP10.21□□□□□ -0.77
ABCA3-201ENST00000301732 TOMM40O96008 361 aa10.21□□□□□ -0.77
ABCA3-201ENST00000301732 SUMO4Q6EEV6 95 aa10.21□□□□□ -0.77
ABCA3-201ENST00000301732 Q6ZVH6 145 aa10.21□□□□□ -0.77
ABCA3-201ENST00000301732 C1orf162Q8NEQ5 155 aaPredicted RBP10.21□□□□□ -0.77
ABCA3-201ENST00000301732 ANKRD36A6QL64 1941 aa10.21□□□□□ -0.77
ABCA3-201ENST00000301732 C15orf61A6NNL5 157 aa10.21□□□□□ -0.78
ABCA3-201ENST00000301732 TNFSF13O75888 250 aa10.21□□□□□ -0.78
ABCA3-201ENST00000301732 LY6DQ14210 128 aa10.21□□□□□ -0.78
ABCA3-201ENST00000301732 AMN1Q8IY45 258 aa10.21□□□□□ -0.78
ABCA3-201ENST00000301732 FAM168AQ92567 244 aa10.21□□□□□ -0.78
ABCA3-201ENST00000301732 ATXN8Q156A1 80 aa10.21□□□□□ -0.78
ABCA3-201ENST00000301732 ANXA2RQ3ZCQ2 193 aa10.21□□□□□ -0.78
ABCA3-201ENST00000301732 WBP1Q96G27 269 aa10.21□□□□□ -0.78
ABCA3-201ENST00000301732 COL4A1P02462 1669 aa10.21□□□□□ -0.78
ABCA3-201ENST00000301732 IGKV1-12A0A0C4DH73 117 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 NBR2O15453 112 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 NDUFA2O43678 99 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 IGKV1D-12P01611 117 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 LAGE3Q14657 143 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 NUP35Q8NFH5 326 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 TMEM158Q8WZ71 300 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 ATAD5Q96QE3 1844 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 FOXF2Q12947 444 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 DYSFO75923 2080 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 TRGV1A0A0A0MS02 117 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 TCRBV4S1A1TA0A5B7 111 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 ERVK11-1P61568 191 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 MGST2Q99735 147 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 B9A039 149 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 TMEM144Q7Z5S9 345 aa10.2□□□□□ -0.78
ABCA3-201ENST00000301732 NPSP0C0P6 89 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 RSPO3Q9BXY4 272 aaPredicted RBP10.19□□□□□ -0.78
ABCA3-201ENST00000301732 ROS1P08922 2347 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 HSD52Q0P140 79 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 TRBV6-7A0A0A0MS04 114 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 ITGB1BP1O14713 200 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 RIPPLY2Q5TAB7 128 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 MORN5Q5VZ52 161 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 NEGR1Q7Z3B1 354 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 MBNL3Q9NUK0 354 aaKnown RBP10.19□□□□□ -0.78
ABCA3-201ENST00000301732 IGFBP3P17936 291 aaPredicted RBP10.19□□□□□ -0.78
ABCA3-201ENST00000301732 MAPK1IP1LQ8NDC0 245 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 GNB1LQ9BYB4 327 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 COL6A6A6NMZ7 2263 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 SRRM4A7MD48 611 aaKnown RBP10.19□□□□□ -0.78
ABCA3-201ENST00000301732 VGLL1Q99990 258 aa10.19□□□□□ -0.78
ABCA3-201ENST00000301732 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
ABCA3-201ENST00000301732 VDAC2P45880 294 aaPredicted RBP10.18□□□□□ -0.78
ABCA3-201ENST00000301732 TCF15Q12870 199 aa10.18□□□□□ -0.78
ABCA3-201ENST00000301732 SIGLEC15Q6ZMC9 328 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms