RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 HYPMO75409 117 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 CTRLP40313 264 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 ERHP84090 104 aaKnown RBP17.61■□□□□ 0.41
TPM4-201ENST00000300933 PRR20EP86478 221 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 PRR20CP86479 221 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 PRR20DP86480 221 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 PRR20BP86481 221 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 PRR20AP86496 221 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 C2orf83Q53S99 150 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 LDLRAD2Q5SZI1 272 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 TMEM167AQ8TBQ9 72 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 ZNF596Q8TC21 504 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 RNASE8Q8TDE3 154 aaKnown RBP17.61■□□□□ 0.41
TPM4-201ENST00000300933 INSIG2Q9Y5U4 225 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 HNRNPA3P51991 378 aaKnown RBP17.6■□□□□ 0.41
TPM4-201ENST00000300933 PTTG1IPP53801 180 aa17.6■□□□□ 0.41
TPM4-201ENST00000300933 MRGPRG-AS1Q2M3A8 158 aa17.6■□□□□ 0.41
TPM4-201ENST00000300933 SLC45A2Q9UMX9 530 aa17.6■□□□□ 0.41
TPM4-201ENST00000300933 CCL25O15444 150 aa17.6■□□□□ 0.41
TPM4-201ENST00000300933 GCHFRP30047 84 aa17.6■□□□□ 0.41
TPM4-201ENST00000300933 MAJINQ3KP22 176 aa17.6■□□□□ 0.41
TPM4-201ENST00000300933 EAF1Q96JC9 268 aaPredicted RBP17.6■□□□□ 0.41
TPM4-201ENST00000300933 RNASE7Q9H1E1 156 aaKnown RBP17.6■□□□□ 0.41
TPM4-201ENST00000300933 LAMTOR2Q9Y2Q5 125 aa17.6■□□□□ 0.41
TPM4-201ENST00000300933 ACACBO00763 2458 aa17.6■□□□□ 0.41
TPM4-201ENST00000300933 A0A1W2PPI3 338 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 ZNF253O75346 499 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 IGLV1-47P01700 117 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 OR10J4P0C629 311 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 TMEM249Q2WGJ8 235 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 UQCR10Q9UDW1 63 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 FLNCQ14315 2725 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 A0A1W2PS18 150 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 BUB1B-PAK6H3BSN5 160 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 NTF3P20783 257 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 CD69Q07108 199 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 V9GYV3 84 aa17.59■□□□□ 0.41
TPM4-201ENST00000300933 IGLC2P0DOY2 106 aa17.58■□□□□ 0.41
TPM4-201ENST00000300933 IGLC3P0DOY3 106 aa17.58■□□□□ 0.41
TPM4-201ENST00000300933 HINT1P49773 126 aaPredicted RBP17.58■□□□□ 0.41
TPM4-201ENST00000300933 RHOBP62745 196 aa17.58■□□□□ 0.41
TPM4-201ENST00000300933 KLRD1Q13241 179 aa17.58■□□□□ 0.41
TPM4-201ENST00000300933 TNXAQ16473 311 aa17.58■□□□□ 0.41
TPM4-201ENST00000300933 MORN5Q5VZ52 161 aa17.58■□□□□ 0.41
TPM4-201ENST00000300933 RAB1BQ9H0U4 201 aa17.58■□□□□ 0.41
TPM4-201ENST00000300933 AREGP15514 252 aa17.58■□□□□ 0.4
TPM4-201ENST00000300933 NPIPB3Q92617 1050 aa17.58■□□□□ 0.4
TPM4-201ENST00000300933 CLEC7AQ9BXN2 247 aa17.58■□□□□ 0.4
TPM4-201ENST00000300933 HILPDAQ9Y5L2 63 aa17.58■□□□□ 0.4
TPM4-201ENST00000300933 CRYBG3Q68DQ2 2970 aa17.58■□□□□ 0.4
TPM4-201ENST00000300933 IGHV1-3A0A0C4DH29 117 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 SRIP30626 198 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 ZNF137PP52743 207 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 ASPHD1Q5U4P2 390 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 MRPL54Q6P161 138 aaKnown RBP17.57■□□□□ 0.4
TPM4-201ENST00000300933 OR8B3Q8NGG8 313 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 OR8B2Q96RD0 313 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 TXNDC17Q9BRA2 123 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 TRAV5A0A0B4J249 113 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 C3orf79P0CE67 100 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 PSG5Q15238 335 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 VMA21Q3ZAQ7 101 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 VSTM2AQ8TAG5 236 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 KCNS1Q96KK3 526 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 GNB1LQ9BYB4 327 aa17.57■□□□□ 0.4
TPM4-201ENST00000300933 UTP20O75691 2785 aaKnown RBP17.57■□□□□ 0.4
TPM4-201ENST00000300933 TRAV9-1A0A075B6T8 112 aa17.56■□□□□ 0.4
TPM4-201ENST00000300933 PRRX1P54821 245 aa17.56■□□□□ 0.4
TPM4-201ENST00000300933 C8orf31Q8N9H6 132 aa17.56■□□□□ 0.4
TPM4-201ENST00000300933 MC5RP33032 325 aa17.56■□□□□ 0.4
TPM4-201ENST00000300933 UNQ5815/PRO19632Q6UWF5 114 aa17.56■□□□□ 0.4
TPM4-201ENST00000300933 PQLC2Q6ZP29 291 aa17.56■□□□□ 0.4
TPM4-201ENST00000300933 FBXL15Q9H469 300 aa17.56■□□□□ 0.4
TPM4-201ENST00000300933 OR7C2O60412 319 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 CENPWQ5EE01 88 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 LCN12Q6JVE5 192 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 RPEQ96AT9 228 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 CACNA1AO00555 2505 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 ZFYVE26Q68DK2 2539 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 DLL1O00548 723 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 CRYBB3P26998 211 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 GNG4P50150 75 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 CHODLQ9H9P2 273 aa17.55■□□□□ 0.4
TPM4-201ENST00000300933 TMEM136Q6ZRR5 245 aa17.54■□□□□ 0.4
TPM4-201ENST00000300933 ZNF503Q96F45 646 aa17.54■□□□□ 0.4
TPM4-201ENST00000300933 IGSF10Q6WRI0 2623 aa17.54■□□□□ 0.4
TPM4-201ENST00000300933 ZNF324O75467 553 aaPredicted RBP17.54■□□□□ 0.4
TPM4-201ENST00000300933 MFAP2P55001 183 aa17.54■□□□□ 0.4
TPM4-201ENST00000300933 FAM71F2Q6NXP2 309 aa17.54■□□□□ 0.4
TPM4-201ENST00000300933 GSX1Q9H4S2 264 aaPredicted RBP17.54■□□□□ 0.4
TPM4-201ENST00000300933 SERTAD4Q9NUC0 356 aa17.54■□□□□ 0.4
TPM4-201ENST00000300933 HELTA6NFD8 242 aa17.53■□□□□ 0.4
TPM4-201ENST00000300933 FBLN7Q53RD9 439 aa17.53■□□□□ 0.4
TPM4-201ENST00000300933 C11orf71Q6IPW1 123 aa17.53■□□□□ 0.4
TPM4-201ENST00000300933 A0A1W2PN81 502 aa17.53■□□□□ 0.4
TPM4-201ENST00000300933 GNLYP22749 145 aa17.53■□□□□ 0.4
TPM4-201ENST00000300933 LEMD1Q68G75 181 aa17.53■□□□□ 0.4
TPM4-201ENST00000300933 NIT1Q86X76 327 aa17.53■□□□□ 0.4
TPM4-201ENST00000300933 C9JCJ5 164 aa17.52■□□□□ 0.4
TPM4-201ENST00000300933 MOSP00540 346 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms