RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 ZNF138P52744 262 aa15.17■□□□□ 0.02
PITPNC1-201ENST00000299954 ZFAND6Q6FIF0 208 aa15.17■□□□□ 0.02
PITPNC1-201ENST00000299954 RPUSD1Q9UJJ7 312 aaKnown RBP15.17■□□□□ 0.02
PITPNC1-201ENST00000299954 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.17■□□□□ 0.02
PITPNC1-201ENST00000299954 SMKR1H3BMG3 65 aa15.17■□□□□ 0.02
PITPNC1-201ENST00000299954 TNFRSF6BO95407 300 aa15.16■□□□□ 0.02
PITPNC1-201ENST00000299954 GAGE2BQ13066 116 aa15.16■□□□□ 0.02
PITPNC1-201ENST00000299954 MTCL1Q9Y4B5 1905 aaKnown RBP15.16■□□□□ 0.02
PITPNC1-201ENST00000299954 TRAV3A0A0B4J244 114 aa15.16■□□□□ 0.02
PITPNC1-201ENST00000299954 ASCL4Q6XD76 172 aa15.16■□□□□ 0.02
PITPNC1-201ENST00000299954 LY6DQ14210 128 aa15.16■□□□□ 0.02
PITPNC1-201ENST00000299954 KLF17Q5JT82 389 aaPredicted RBP15.16■□□□□ 0.02
PITPNC1-201ENST00000299954 INS-IGF2F8WCM5 200 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 NDUFS8O00217 210 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 INSP01308 110 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 COL18A1P39060 1754 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 RGPD3A6NKT7 1758 aaPredicted RBP15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 TRGV1A0A0A0MS02 117 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 CDK2AP2O75956 126 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 LINC00271P0C7V0 271 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 TMEM256Q8N2U0 113 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 ANKRD36A6QL64 1941 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 VMO1Q7Z5L0 202 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 FOXF2Q12947 444 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 MS4A6AQ9H2W1 248 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 TRAV8-3A0A0A6YYJ7 113 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 FOXG1P55316 489 aaPredicted RBP15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 C15orf32Q32M92 178 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 GTSF1LQ9H1H1 148 aa15.15■□□□□ 0.02
PITPNC1-201ENST00000299954 F2Z2F3 143 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 GHRHP01286 108 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 IGHV1-46P01743 117 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 PPBPP02775 128 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 MORN3Q6PF18 240 aaPredicted RBP15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 TRAV41A0A0B4J266 112 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 PSG1P11464 419 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 ZNF124Q15973 351 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 MBNL3Q9NUK0 354 aaKnown RBP15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 COL4A1P02462 1669 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 A0A087WX48 190 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 MGST2Q99735 147 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 IGKV1-12A0A0C4DH73 117 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 IGKV1D-12P01611 117 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 WNT2P09544 360 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 NRN1LQ496H8 165 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 ACTL10Q5JWF8 245 aa15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 SLC25A39Q9BZJ4 359 aaPredicted RBP15.14■□□□□ 0.01
PITPNC1-201ENST00000299954 TNFSF13O75888 250 aa15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 ID3Q02535 119 aa15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 RNASE6Q93091 150 aaKnown RBP15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 SRSF7Q16629 238 aaKnown RBP eCLIP15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 C2orf82Q6UX34 121 aa15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 GGTLC1Q9BX51 225 aa15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 OVOL1O14753 267 aa15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 FGF16O43320 207 aa15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 SH2D1AO60880 128 aa15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 UBE2E2Q96LR5 201 aa15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 CSRP2Q16527 193 aa15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 POLR2AP24928 1970 aaKnown RBP15.13■□□□□ 0.01
PITPNC1-201ENST00000299954 TMEM238C9JI98 176 aa15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 TPTE2P1Q5T6R2 138 aa15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 FCN3O75636 299 aa15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 LINC00205P59089 165 aa15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 SEC11AP67812 179 aa15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 PRADC1Q9BSG0 188 aa15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 WDR83OSQ9Y284 106 aa15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 ARHGEF17Q96PE2 2063 aaPredicted RBP15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 MYOFQ9NZM1 2061 aa15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 IGHV2-26A0A0B4J1V2 119 aa15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 SRRM4A7MD48 611 aaKnown RBP15.12■□□□□ 0.01
PITPNC1-201ENST00000299954 TMEM200BQ69YZ2 307 aa15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 BRD3OSQ6XYD6 125 aa15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 COLCA2A8K830 154 aa15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 C14orf178Q8N769 122 aaPredicted RBP15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 A0A087WWL8 130 aa15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 LGALS1P09382 135 aaKnown RBP15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 METRNQ9UJH8 293 aa15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 ITGB1BP1O14713 200 aa15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 CSTL1Q9H114 145 aa15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 MRPL14Q6P1L8 145 aaKnown RBP15.11■□□□□ 0.01
PITPNC1-201ENST00000299954 C1orf159Q96HA4 380 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 TRAV13-1A0A0B4J241 112 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 DEFB121Q5J5C9 76 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 MPV17L2Q567V2 206 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 GAGE2AQ6NT46 116 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 TEX43Q6ZNM6 134 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 DTX2Q86UW9 622 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 NUP35Q8NFH5 326 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 SEC16AO15027 2179 aa15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 COL11A1P12107 1806 aaPredicted RBP15.1■□□□□ 0.01
PITPNC1-201ENST00000299954 IGKV1-27A0A075B6S5 117 aa15.09■□□□□ 0.01
PITPNC1-201ENST00000299954 LYPD3O95274 346 aa15.09■□□□□ 0.01
PITPNC1-201ENST00000299954 FAM90A2PQ658T7 463 aa15.09■□□□□ 0.01
PITPNC1-201ENST00000299954 TMEM158Q8WZ71 300 aa15.09■□□□□ 0.01
PITPNC1-201ENST00000299954 AGMATQ9BSE5 352 aa15.09■□□□□ 0.01
PITPNC1-201ENST00000299954 STRCP1A6NGW2 1772 aa15.09■□□□□ 0.01
PITPNC1-201ENST00000299954 SSBP2P81877 361 aaPredicted RBP15.09■□□□□ 0.01
PITPNC1-201ENST00000299954 SPXQ9BT56 116 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms