RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 RNFT1Q5M7Z0 435 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 RBPMS2Q6ZRY4 209 aaKnown RBP8.3□□□□□ -1.08
LMX1A-201ENST00000294816 MS4A6AQ9H2W1 248 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 ZNF257Q9Y2Q1 563 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 DSPP15924 2871 aaKnown RBP8.3□□□□□ -1.08
LMX1A-201ENST00000294816 RP1L1Q8IWN7 2480 aaPredicted RBP8.3□□□□□ -1.08
LMX1A-201ENST00000294816 SRRM5B3KS81 715 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 FXYD7P58549 80 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 RPL24P83731 157 aaKnown RBP8.3□□□□□ -1.08
LMX1A-201ENST00000294816 PMS2CLQ68D20 193 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 AP5S1Q9NUS5 200 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 KBTBD11-OT1A0A1B0GTJ5 212 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 NCR2O95944 276 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 CT45A6P0DMU7 189 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 CT45A5P0DMU8 189 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 CT45A7P0DMV0 189 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 COX8AP10176 69 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 VWA1Q6PCB0 445 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 CLEC2AQ6UVW9 174 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 PRNTQ86SH4 94 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 CIARTQ8N365 385 aaPredicted RBP8.3□□□□□ -1.08
LMX1A-201ENST00000294816 OR1L8Q8NGR8 309 aa8.3□□□□□ -1.08
LMX1A-201ENST00000294816 SERTM2A0A1B0GWG4 89 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 E7EUB6 86 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 NBEAP1P0C6P0 100 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 ACP1P24666 158 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 GUSBP1Q15486 140 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 PEAR1Q5VY43 1037 aaPredicted RBP8.29□□□□□ -1.08
LMX1A-201ENST00000294816 ZNF714Q96N38 554 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 THYN1Q9P016 225 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 F11RQ9Y624 299 aaKnown RBP8.29□□□□□ -1.08
LMX1A-201ENST00000294816 A6NDN8 102 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 FBLL1A6NHQ2 334 aaKnown RBP8.29□□□□□ -1.08
LMX1A-201ENST00000294816 PAX2Q02962 417 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 ATP1A1-AS1Q5TC04 95 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 HCP5Q6MZN7 132 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 C2orf91Q6ZV80 131 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 OR1N2Q8NGR9 330 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 ITLN1Q8WWA0 313 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 JMJD8Q96S16 334 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 CCL13Q99616 98 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 MRPL36Q9P0J6 103 aaKnown RBP8.29□□□□□ -1.08
LMX1A-201ENST00000294816 PCSK5Q92824 1860 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 TANC2Q9HCD6 1990 aa8.29□□□□□ -1.08
LMX1A-201ENST00000294816 MZT1Q08AG7 82 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 OR10AG1Q8NH19 301 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 MRPL20Q9BYC9 149 aaKnown RBP8.28□□□□□ -1.08
LMX1A-201ENST00000294816 PRO3102Q9H379 93 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 C1RLQ9NZP8 487 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 ROS1P08922 2347 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 TCRBV4S1A1TA0A5B7 111 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 PSMB11A5LHX3 300 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 GNG7O60262 68 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 CSN1S1P47710 185 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 SEC11AP67812 179 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 C1orf185Q5T7R7 199 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 OR2K2Q8NGT1 345 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 PERPQ96FX8 193 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 C7orf69Q9H7B7 122 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 RAB9BQ9NP90 201 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 RABAC1Q9UI14 185 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 MAP1BP46821 2468 aaKnown RBP8.28□□□□□ -1.08
LMX1A-201ENST00000294816 FAM87AP0C7U9 286 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 SP9P0CG40 484 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 NMUP48645 174 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 Q6ZT83 130 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 FAM216BQ8N7L0 139 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 C5orf17Q8NAS9 161 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 SRSF12Q8WXF0 261 aaKnown RBP8.28□□□□□ -1.08
LMX1A-201ENST00000294816 CACNG8Q8WXS5 425 aa8.28□□□□□ -1.08
LMX1A-201ENST00000294816 A0A0G2JLM5 398 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 PLP1P60201 277 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 PRSS57Q6UWY2 283 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 GOLT1AQ6ZVE7 132 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 Q71RC1 249 aaPredicted RBP8.27□□□□□ -1.09
LMX1A-201ENST00000294816 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.27□□□□□ -1.09
LMX1A-201ENST00000294816 Q9H3A6 140 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 WFDC3Q8IUB2 231 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 SPCS1Q9Y6A9 102 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 C9orf118A6NHY6 69 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 ARMS2P0C7Q2 107 aa8.27□□□□□ -1.09
LMX1A-201ENST00000294816 SUB1P53999 127 aaKnown RBP eCLIP8.27□□□□□ -1.09
LMX1A-201ENST00000294816 INTS1Q8N201 2190 aaKnown RBP8.26□□□□□ -1.09
LMX1A-201ENST00000294816 ZDBF2Q9HCK1 2354 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 C9orf172C9J069 976 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 IGKV3-15P01624 115 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 WT1-ASQ06250 92 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 POU2AF1Q16633 256 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 S100A7AQ86SG5 101 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 NDFIP1Q9BT67 221 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 ZNF747Q9BV97 191 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 SOX21Q9Y651 276 aaPredicted RBP8.26□□□□□ -1.09
LMX1A-201ENST00000294816 IGHV1-18A0A0C4DH31 117 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 A1L4Q6 167 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 M0R1B8 84 aa8.26□□□□□ -1.09
LMX1A-201ENST00000294816 ENSAO43768 121 aaKnown RBP8.26□□□□□ -1.09
LMX1A-201ENST00000294816 TCRAP04437 139 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms