RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 ZNF672Q499Z4 452 aaPredicted RBP10.3□□□□□ -0.76
SLX4-201ENST00000294008 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
SLX4-201ENST00000294008 RPUSD1Q9UJJ7 312 aaKnown RBP10.3□□□□□ -0.76
SLX4-201ENST00000294008 ZNF525Q8N782 197 aa10.3□□□□□ -0.76
SLX4-201ENST00000294008 WFDC9Q8NEX5 89 aa10.3□□□□□ -0.76
SLX4-201ENST00000294008 C5orf66Q9H5L9 145 aa10.3□□□□□ -0.76
SLX4-201ENST00000294008 Q96M66 194 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 MRPL14Q6P1L8 145 aaKnown RBP10.29□□□□□ -0.76
SLX4-201ENST00000294008 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 OVOL2Q9BRP0 275 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 DOPEY2Q9Y3R5 2298 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 FAM90A20PA6NIJ5 464 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 Q6ZQT7 251 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 IGKV1-39P01597 117 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 IGKV1D-39P04432 117 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.29□□□□□ -0.76
SLX4-201ENST00000294008 ABCA4P78363 2273 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 EPOPA6NHQ4 379 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 NDUFS8O00217 210 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 SMDT1Q9H4I9 107 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 LRP6O75581 1613 aa10.29□□□□□ -0.76
SLX4-201ENST00000294008 ZNF98A6NK75 572 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 CRYGCP07315 174 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 ZNF503Q96F45 646 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 D6R8Y8 96 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 EFNA2O43921 213 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 SUPT4H1P63272 117 aaKnown RBP10.28□□□□□ -0.76
SLX4-201ENST00000294008 C9orf153Q5TBE3 101 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 SMKR1H3BMG3 65 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 CD55P08174 381 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 EFNA4P52798 201 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 RCC1LQ96I51 464 aaKnown RBP10.28□□□□□ -0.76
SLX4-201ENST00000294008 TIRAPP58753 221 aa10.28□□□□□ -0.76
SLX4-201ENST00000294008 SPINK13Q1W4C9 94 aa10.27□□□□□ -0.76
SLX4-201ENST00000294008 GGACTQ9BVM4 153 aa10.27□□□□□ -0.76
SLX4-201ENST00000294008 C9JAW5 83 aa10.27□□□□□ -0.76
SLX4-201ENST00000294008 UPK2O00526 184 aa10.27□□□□□ -0.77
SLX4-201ENST00000294008 F2Z2F3 143 aa10.27□□□□□ -0.77
SLX4-201ENST00000294008 Q0VFX4 171 aa10.27□□□□□ -0.77
SLX4-201ENST00000294008 IGHG4P01861 327 aa10.27□□□□□ -0.77
SLX4-201ENST00000294008 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.27□□□□□ -0.77
SLX4-201ENST00000294008 TMEM158Q8WZ71 300 aa10.27□□□□□ -0.77
SLX4-201ENST00000294008 CHCHD1Q96BP2 118 aaKnown RBP10.27□□□□□ -0.77
SLX4-201ENST00000294008 TAF1P21675 1872 aa10.27□□□□□ -0.77
SLX4-201ENST00000294008 RAMP3O60896 148 aa10.27□□□□□ -0.77
SLX4-201ENST00000294008 PEX11BO96011 259 aa10.27□□□□□ -0.77
SLX4-201ENST00000294008 ZNF646O15015 1829 aaPredicted RBP10.27□□□□□ -0.77
SLX4-201ENST00000294008 PIKFYVEQ9Y2I7 2098 aa10.27□□□□□ -0.77
SLX4-201ENST00000294008 TCF15Q12870 199 aa10.26□□□□□ -0.77
SLX4-201ENST00000294008 IGKV1D-12P01611 117 aa10.26□□□□□ -0.77
SLX4-201ENST00000294008 IGHV2-26A0A0B4J1V2 119 aa10.26□□□□□ -0.77
SLX4-201ENST00000294008 RGPD1P0DJD0 1748 aa10.26□□□□□ -0.77
SLX4-201ENST00000294008 UBE2AP49459 152 aa10.26□□□□□ -0.77
SLX4-201ENST00000294008 HEATR1Q9H583 2144 aaKnown RBP10.26□□□□□ -0.77
SLX4-201ENST00000294008 A0A0G2JK05 382 aa10.26□□□□□ -0.77
SLX4-201ENST00000294008 LINC01619G3V211 115 aa10.26□□□□□ -0.77
SLX4-201ENST00000294008 COX5BP10606 129 aa10.26□□□□□ -0.77
SLX4-201ENST00000294008 INTS1Q8N201 2190 aaKnown RBP10.26□□□□□ -0.77
SLX4-201ENST00000294008 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 C10orf55Q5SWW7 151 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 MORN5Q5VZ52 161 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 CRYBG1Q9Y4K1 1723 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 J3QKU1 62 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 C1QL4Q86Z23 238 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 RHPN1-AS1Q9BWJ2 59 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 UBL5Q9BZL1 73 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 CHAC1Q9BUX1 264 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 OVOL3O00110 214 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 BPESC1Q9GZL8 116 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 C1QTNF9P0C862 333 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 TRACP01848 142 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 GPHB5Q86YW7 130 aa10.25□□□□□ -0.77
SLX4-201ENST00000294008 TOGARAM1Q9Y4F4 1720 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 NUP214P35658 2090 aaPredicted RBP10.24□□□□□ -0.77
SLX4-201ENST00000294008 C5orf67F2Z3F1 127 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 DANCRP0C864 163 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 RBM3P98179 157 aaKnown RBP10.24□□□□□ -0.77
SLX4-201ENST00000294008 BMPERQ8N8U9 685 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 FSTP19883 344 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 ARFGEF3Q5TH69 2177 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 C20orf204Q6ZNR8 217 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 TMEM105Q8N8V8 129 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 RALGAPA1Q6GYQ0 2036 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 E9PLN8 166 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 ZNRF2Q8NHG8 242 aa10.24□□□□□ -0.77
SLX4-201ENST00000294008 IGLV1-36A0A0B4J1U3 117 aa10.23□□□□□ -0.77
SLX4-201ENST00000294008 XCL1P47992 114 aa10.23□□□□□ -0.77
SLX4-201ENST00000294008 TMEM170AQ8WVE7 144 aa10.23□□□□□ -0.77
SLX4-201ENST00000294008 SH2D1AO60880 128 aa10.23□□□□□ -0.77
SLX4-201ENST00000294008 HLA-DQB1P01920 261 aa10.23□□□□□ -0.77
SLX4-201ENST00000294008 RPL34P49207 117 aaKnown RBP10.23□□□□□ -0.77
SLX4-201ENST00000294008 RNASE13Q5GAN3 156 aaKnown RBP10.23□□□□□ -0.77
SLX4-201ENST00000294008 BCL6BQ8N143 479 aaPredicted RBP10.23□□□□□ -0.77
SLX4-201ENST00000294008 TRBV7-1A0A0A6YYK4 115 aa10.23□□□□□ -0.77
SLX4-201ENST00000294008 SPATA25Q9BR10 227 aa10.23□□□□□ -0.77
SLX4-201ENST00000294008 IGHV1-18A0A0C4DH31 117 aa10.23□□□□□ -0.77
SLX4-201ENST00000294008 BUB3O43684 328 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms