RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 RNF24Q9Y225 148 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 KLRD1Q13241 179 aa11.71□□□□□ -0.54
TMEM47-201ENST00000275954 SSBP4Q9BWG4 385 aaPredicted RBP11.71□□□□□ -0.54
TMEM47-201ENST00000275954 DKK4Q9UBT3 224 aa11.71□□□□□ -0.54
TMEM47-201ENST00000275954 COL8A2P25067 703 aa11.71□□□□□ -0.54
TMEM47-201ENST00000275954 Q6ZSR3 168 aa11.71□□□□□ -0.54
TMEM47-201ENST00000275954 LINC00479Q96M42 142 aa11.71□□□□□ -0.54
TMEM47-201ENST00000275954 RABAC1Q9UI14 185 aa11.71□□□□□ -0.54
TMEM47-201ENST00000275954 E7EQL1 145 aa11.7□□□□□ -0.54
TMEM47-201ENST00000275954 TFPI2P48307 235 aa11.7□□□□□ -0.54
TMEM47-201ENST00000275954 MAST4O15021 2626 aa11.7□□□□□ -0.54
TMEM47-201ENST00000275954 IGHV1-8P0DP01 117 aa11.7□□□□□ -0.54
TMEM47-201ENST00000275954 MAS1LP35410 378 aa11.7□□□□□ -0.54
TMEM47-201ENST00000275954 ATP5IP56385 69 aaPredicted RBP11.7□□□□□ -0.54
TMEM47-201ENST00000275954 Q8NA96 180 aa11.7□□□□□ -0.54
TMEM47-201ENST00000275954 YTHDF2Q9Y5A9 579 aaKnown RBP11.7□□□□□ -0.54
TMEM47-201ENST00000275954 ANKRD17O75179 2603 aaKnown RBP11.69□□□□□ -0.54
TMEM47-201ENST00000275954 BMPR1BO00238 502 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 IGLV1-44P01699 117 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 TCF24Q7RTU0 167 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 C11orf44Q8N8P7 122 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 HIST1H2BLQ99880 126 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 LINC00527Q9UJ94 153 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 DMRT1Q9Y5R6 373 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 SETXQ7Z333 2677 aaKnown RBP11.69□□□□□ -0.54
TMEM47-201ENST00000275954 TRBV24-1A0A075B6N3 115 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 A0A1B0GW64 132 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 F5H697 171 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 GCGP01275 180 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 PRSS1P07477 247 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 EML5Q05BV3 1969 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.69□□□□□ -0.54
TMEM47-201ENST00000275954 C15orf65H3BRN8 121 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 SERF1AO75920 110 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 AREGP15514 252 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 SP5Q6BEB4 398 aaPredicted RBP11.69□□□□□ -0.54
TMEM47-201ENST00000275954 SLC25A48Q6ZT89 311 aaKnown RBP11.69□□□□□ -0.54
TMEM47-201ENST00000275954 ST6GALNAC3Q8NDV1 305 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 RNASEH2CQ8TDP1 164 aaKnown RBP11.69□□□□□ -0.54
TMEM47-201ENST00000275954 BET1LQ9NYM9 111 aa11.69□□□□□ -0.54
TMEM47-201ENST00000275954 IGHV2-26A0A0B4J1V2 119 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 H0YJW9 148 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 DIAPH2-AS1Q14236 149 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 KRTAP27-1Q3LI81 207 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 PYY3Q5JQD4 70 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 GPR183P32249 361 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 ADMP35318 185 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 LOXL3P58215 753 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 IGFL3Q6UXB1 125 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 C17orf58Q2M2W7 97 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 C19orf35Q6ZS72 473 aa11.68□□□□□ -0.54
TMEM47-201ENST00000275954 ZMAT5Q9UDW3 170 aaKnown RBP11.68□□□□□ -0.54
TMEM47-201ENST00000275954 TMEM189A5PLL7 270 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 FOLR2P14207 255 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 TWIST1Q15672 202 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 HIST3H2BBQ8N257 126 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 TMEM256Q8N2U0 113 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 SELENOKQ9Y6D0 94 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 F8P00451 2351 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 TCRBV4S1A1TA0A5B7 111 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 IGFBPL1Q8WX77 278 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 Q9H3A6 140 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 FBXL7Q9UJT9 491 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 DSCAMO60469 2012 aa11.67□□□□□ -0.54
TMEM47-201ENST00000275954 A0A1B0GUS0 222 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 OR2T8A6NH00 312 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
TMEM47-201ENST00000275954 TMEM170AQ8WVE7 144 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 C21orf62Q9NYP8 219 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 TCAPO15273 167 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 ASPHD1Q5U4P2 390 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 OR5R1Q8NH85 324 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 ZNF257Q9Y2Q1 563 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 FAM168AQ92567 244 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 ASCL2Q99929 193 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 TMEM191AQ9H0A3 160 aa11.66□□□□□ -0.54
TMEM47-201ENST00000275954 FAM90A9PA6NNJ1 464 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.54
TMEM47-201ENST00000275954 PRSS8Q16651 343 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 MSMPQ1L6U9 139 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 TBL2Q9Y4P3 447 aaKnown RBP11.65□□□□□ -0.54
TMEM47-201ENST00000275954 TRAV8-1A0A0A6YYK1 113 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 A0A1B0GV90 55 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 NBR2O15453 112 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 AMBPP02760 352 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 RNASE2P10153 161 aaKnown RBP11.65□□□□□ -0.54
TMEM47-201ENST00000275954 RELQ04864 619 aaPredicted RBP11.65□□□□□ -0.54
TMEM47-201ENST00000275954 RNF151Q2KHN1 245 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 RPL7P18124 248 aaKnown RBP11.65□□□□□ -0.54
TMEM47-201ENST00000275954 CNTFRP26992 372 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 COMPP49747 757 aaPredicted RBP11.65□□□□□ -0.54
TMEM47-201ENST00000275954 C2orf83Q53S99 150 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 C10orf91Q5T1B1 145 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 GRAMD2BQ96HH9 432 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 MAP1LC3CQ9BXW4 147 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 USP24Q9UPU5 2620 aa11.65□□□□□ -0.54
TMEM47-201ENST00000275954 CEACAM8P31997 349 aaPredicted RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms