RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 COMPP49747 757 aaPredicted RBP10.31□□□□□ -0.76
CPSF6-201ENST00000266679 PKIAP61925 76 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 ASPHD1Q5U4P2 390 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 ETFRF1Q6IPR1 90 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 ZNF329Q86UD4 541 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 OR8B3Q8NGG8 313 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 FXYD5Q96DB9 178 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 OR8B2Q96RD0 313 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 FBXL15Q9H469 300 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 OSTCQ9NRP0 149 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 AKAP9Q99996 3911 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 FCN1O00602 326 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 FSTL3O95633 263 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 FBXL19-AS1Q494R0 122 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 BEND2Q8NDZ0 799 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 C22orf15Q8WYQ4 148 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 SERTAD4Q9NUC0 356 aa10.31□□□□□ -0.76
CPSF6-201ENST00000266679 TRAV34A0A0B4J273 112 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 TSTD3H0UI37 97 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 PEX7O00628 323 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 CRYGCP07315 174 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 GNG5P63218 68 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 SLC35B1P78383 322 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 DEFA6Q01524 100 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 IBA57Q5T440 356 aaKnown RBP10.3□□□□□ -0.76
CPSF6-201ENST00000266679 PERPQ96FX8 193 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 GSX1Q9H4S2 264 aaPredicted RBP10.3□□□□□ -0.76
CPSF6-201ENST00000266679 AMMECR1Q9Y4X0 333 aaPredicted RBP10.3□□□□□ -0.76
CPSF6-201ENST00000266679 OTOGQ6ZRI0 2925 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 TEX22C9J3V5 150 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 ISLRO14498 428 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 ADORA2A-AS1P86434 159 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 PLGLAQ15195 96 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 PVRIGQ6DKI7 326 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 PPP1R27Q86WC6 154 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 CMTM2Q8TAZ6 248 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 BLNKQ8WV28 456 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 IGFBPL1Q8WX77 278 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 TRGV9Q99603 122 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 CDC42EP3Q9UKI2 254 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 PDZD2O15018 2839 aa10.3□□□□□ -0.76
CPSF6-201ENST00000266679 ITLN2Q8WWU7 325 aaPredicted RBP10.29□□□□□ -0.76
CPSF6-201ENST00000266679 TP53TG3Q9ULZ0 132 aa10.29□□□□□ -0.76
CPSF6-201ENST00000266679 TEP1Q99973 2627 aaKnown RBP10.29□□□□□ -0.76
CPSF6-201ENST00000266679 CA1P00915 261 aaPredicted RBP10.29□□□□□ -0.76
CPSF6-201ENST00000266679 RBP4P02753 201 aa10.29□□□□□ -0.76
CPSF6-201ENST00000266679 CRISP2P16562 243 aa10.29□□□□□ -0.76
CPSF6-201ENST00000266679 TAS2R60P59551 318 aa10.29□□□□□ -0.76
CPSF6-201ENST00000266679 RPH3ALQ9UNE2 315 aa10.29□□□□□ -0.76
CPSF6-201ENST00000266679 F11RQ9Y624 299 aaKnown RBP10.29□□□□□ -0.76
CPSF6-201ENST00000266679 DDTP30046 118 aa10.28□□□□□ -0.76
CPSF6-201ENST00000266679 RANP62826 216 aaKnown RBP10.28□□□□□ -0.76
CPSF6-201ENST00000266679 LDLRAD2Q5SZI1 272 aa10.28□□□□□ -0.76
CPSF6-201ENST00000266679 MRPL54Q6P161 138 aaKnown RBP10.28□□□□□ -0.76
CPSF6-201ENST00000266679 C8orf46Q8TAG6 207 aa10.28□□□□□ -0.76
CPSF6-201ENST00000266679 SRSF12Q8WXF0 261 aaKnown RBP10.28□□□□□ -0.76
CPSF6-201ENST00000266679 F2Z2F3 143 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 H3BTX0 84 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 TIMM23O14925 209 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 HYPMO75409 117 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 SLC25A5P05141 298 aaKnown RBP10.27□□□□□ -0.76
CPSF6-201ENST00000266679 LIPFP07098 398 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 LINC00310P59036 64 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 CX3CL1P78423 397 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 KLRD1Q13241 179 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 LEMD1Q68G75 181 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 SSBP3Q9BWW4 388 aaPredicted RBP10.27□□□□□ -0.76
CPSF6-201ENST00000266679 NAT8BQ9UHF3 227 aa10.27□□□□□ -0.76
CPSF6-201ENST00000266679 TRBV9A0A0B4J1U6 114 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 LY6LH3BQJ8 138 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 CORTO00230 105 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 SERF1AO75920 110 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 SCGB1D1O95968 90 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 RAB4BP61018 213 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 ARF6P62330 175 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 TPTE2P1Q5T6R2 138 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 BAGE2Q86Y30 109 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 LURAP1LQ8IV03 231 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 ZNF664Q8N3J9 261 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 TMEM116Q8NCL8 245 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 C14orf144Q96I85 54 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 GNB1LQ9BYB4 327 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 RAB1BQ9H0U4 201 aa10.27□□□□□ -0.77
CPSF6-201ENST00000266679 ANKHD1Q8IWZ3 2542 aaKnown RBP10.27□□□□□ -0.77
CPSF6-201ENST00000266679 ARHGAP32A7KAX9 2087 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 A0A1W2PRD5 423 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 A0A1W2PRF3 423 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 A0A1W2PRM7 423 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 SMIM27A0A1W2PRY6 76 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 LYZP61626 148 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 RPL19P84098 196 aaKnown RBP10.26□□□□□ -0.77
CPSF6-201ENST00000266679 PRR27Q6MZM9 219 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 TMEM136Q6ZRR5 245 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 BAGE3Q86Y29 109 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 LY6G5BQ8NDX9 201 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 FAM168AQ92567 244 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 SGK494Q96LW2 274 aa10.26□□□□□ -0.77
CPSF6-201ENST00000266679 MS4A10Q96PG2 267 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms