RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 CYB561D1Q8N8Q1 229 aa5.15□□□□□ -1.59
BRIP1-201ENST00000259008 ST6GALNAC6Q969X2 333 aa5.15□□□□□ -1.59
BRIP1-201ENST00000259008 TBX15Q96SF7 602 aa5.15□□□□□ -1.59
BRIP1-201ENST00000259008 TRAV5A0A0B4J249 113 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 H3BQ15 152 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 OBSL1O75147 1896 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 LY6G6DO95868 133 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 PSG1P11464 419 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 LMO1P25800 156 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 PSMB2P49721 201 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 TMEM183BQ1AE95 376 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 TMEM183AQ8IXX5 376 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 OR4C5Q8NGB2 326 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 PHYHIPLQ96FC7 376 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 ALX4Q9H161 411 aaPredicted RBP5.14□□□□□ -1.59
BRIP1-201ENST00000259008 NPDC1Q9NQX5 325 aaPredicted RBP5.14□□□□□ -1.59
BRIP1-201ENST00000259008 RPLP1P05386 114 aaKnown RBP5.14□□□□□ -1.59
BRIP1-201ENST00000259008 OR10J3Q5JRS4 329 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 SCRT1Q9BWW7 348 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 C1QTNF4Q9BXJ3 329 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 MAP1LC3AQ9H492 121 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 PHF3Q92576 2039 aaKnown RBP5.14□□□□□ -1.59
BRIP1-201ENST00000259008 TCTEX1D4Q5JR98 221 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 CFAP161Q6P656 301 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 STPG2Q8N412 459 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 VOPP1Q96AW1 172 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 ALPK2Q86TB3 2170 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 RPL13AP40429 203 aaKnown RBP5.14□□□□□ -1.59
BRIP1-201ENST00000259008 MST1LQ2TV78 715 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 TEX36Q5VZQ5 186 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 KCNS1Q96KK3 526 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 J3QRE1 110 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 FAM74A3Q4VXF1 159 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 AWAT1Q58HT5 328 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 CENPWQ5EE01 88 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 UQCC3Q6UW78 93 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 C1QL4Q86Z23 238 aa5.14□□□□□ -1.59
BRIP1-201ENST00000259008 BCL6BQ8N143 479 aaPredicted RBP5.14□□□□□ -1.59
BRIP1-201ENST00000259008 RBM38Q9H0Z9 239 aaKnown RBP5.14□□□□□ -1.59
BRIP1-201ENST00000259008 PEX7O00628 323 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 CD5P06127 495 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 FAM3BP58499 235 aaPredicted RBP5.13□□□□□ -1.59
BRIP1-201ENST00000259008 ISOC2Q96AB3 205 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 FMC1Q96HJ9 113 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 CEP250Q9BV73 2442 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 PCNX2A6NKB5 2137 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 CENPVL3A0A0U1RRI6 287 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 CGB3P0DN86 165 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 MDKP21741 143 aaPredicted RBP5.13□□□□□ -1.59
BRIP1-201ENST00000259008 RPL29P47914 159 aaKnown RBP5.13□□□□□ -1.59
BRIP1-201ENST00000259008 FHITP49789 147 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 CIARTQ8N365 385 aaPredicted RBP5.13□□□□□ -1.59
BRIP1-201ENST00000259008 TCEAL7Q9BRU2 100 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 GGACTQ9BVM4 153 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 F11RQ9Y624 299 aaKnown RBP5.13□□□□□ -1.59
BRIP1-201ENST00000259008 FREM3P0C091 2139 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 TRAV21A0A0B4J279 112 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 PMS2P5A8MQ11 134 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 GCSHP23434 173 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 SRSF9Q13242 221 aaKnown RBP eCLIP5.13□□□□□ -1.59
BRIP1-201ENST00000259008 C17orf58Q2M2W7 97 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 C9orf66Q5T8R8 295 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 TOMM20LQ6UXN7 152 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 HAPLN4Q86UW8 402 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 SGMS2Q8NHU3 365 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 GFI1Q99684 422 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 CTSZQ9UBR2 303 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 PTPRSQ13332 1948 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 A0A1B0GWJ7 208 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 NR2C2APQ86WQ0 139 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 OTORQ9NRC9 128 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 ZNF318Q5VUA4 2279 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 A0A087WX48 190 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 SCO2A0A1W2PP80 73 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 KNCNA6PVL3 124 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 SRRM4A7MD48 611 aaKnown RBP5.13□□□□□ -1.59
BRIP1-201ENST00000259008 MEF2BQ02080 365 aaPredicted RBP5.13□□□□□ -1.59
BRIP1-201ENST00000259008 PNRC1Q12796 327 aaPredicted RBP5.13□□□□□ -1.59
BRIP1-201ENST00000259008 TMEM144Q7Z5S9 345 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 LRTM2Q8N967 370 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 ASCL2Q99929 193 aa5.13□□□□□ -1.59
BRIP1-201ENST00000259008 ZNF407Q9C0G0 2248 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 H7C2G1 150 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 SLURP1P55000 103 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 REC114Q7Z4M0 266 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 FAM89BQ8N5H3 189 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 ARL6IP6Q8N6S5 226 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 HIST1H2BAQ96A08 127 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 BPTFQ12830 3046 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 MMP23AO75900 390 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 NDUFB8O95169 186 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 CXCL2P19875 107 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 LRRK1Q38SD2 2015 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 DENND4AQ7Z401 1863 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 DNAJC9-AS1A6NH13 148 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 CCKARP32238 428 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 H2BFSP57053 126 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 EXOC3-AS1Q8N2X6 119 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 OR13C6PQ8NH95 151 aa5.12□□□□□ -1.59
BRIP1-201ENST00000259008 TNRC6AQ8NDV7 1962 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms