RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 C2orf83Q53S99 150 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 CENPWQ5EE01 88 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 LINC00574Q9H8X3 128 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 SRRM4A7MD48 611 aaKnown RBP7.48□□□□□ -1.21
RPA1-201ENST00000254719 M0QZ24 198 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 PAX1P15863 534 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 FOXL1Q12952 345 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 VKORC1L1Q8N0U8 176 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 TEX45Q8NA69 505 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 ZNF114Q8NC26 417 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 NPIPB3Q92617 1050 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 WNT10AQ9GZT5 417 aa7.48□□□□□ -1.21
RPA1-201ENST00000254719 SAA2-SAA4A0A096LPE2 208 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.47□□□□□ -1.21
RPA1-201ENST00000254719 A0A1B0GW15 77 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 C9JCJ5 164 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 THBDP07204 575 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 SAA2P0DJI9 122 aaPredicted RBP7.47□□□□□ -1.21
RPA1-201ENST00000254719 PSG9Q00887 426 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 CD69Q07108 199 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 CDSNQ15517 529 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 IGFL3Q6UXB1 125 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 NUP37Q8NFH4 326 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 NEU4Q8WWR8 484 aaPredicted RBP7.47□□□□□ -1.21
RPA1-201ENST00000254719 RPL7P18124 248 aaKnown RBP7.47□□□□□ -1.21
RPA1-201ENST00000254719 TCTAP57738 103 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 OR2D3Q8NGH3 330 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 ST6GALNAC6Q969X2 333 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 HSPB9Q9BQS6 159 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 OR2T8A6NH00 312 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 FAM106CPP0CH98 169 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 PSMG4Q5JS54 123 aa7.47□□□□□ -1.21
RPA1-201ENST00000254719 IGFBP2P18065 325 aa7.46□□□□□ -1.21
RPA1-201ENST00000254719 FAM27E3Q08E93 113 aa7.46□□□□□ -1.21
RPA1-201ENST00000254719 LEAP2Q969E1 77 aa7.46□□□□□ -1.21
RPA1-201ENST00000254719 ZNF503Q96F45 646 aa7.46□□□□□ -1.21
RPA1-201ENST00000254719 RNF5Q99942 180 aa7.46□□□□□ -1.21
RPA1-201ENST00000254719 LPAR2Q9HBW0 351 aa7.46□□□□□ -1.21
RPA1-201ENST00000254719 LINC00310P59036 64 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 Q6AWC8 147 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 UNQ5815/PRO19632Q6UWF5 114 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 Q6ZN92 141 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 GGTLC1Q9BX51 225 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 CBY1Q9Y3M2 126 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 ATRXP46100 2492 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 COL5A1-AS1Q5SY13 56 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 TREML4Q6UXN2 200 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 FAM216BQ8N7L0 139 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 LSM4Q9Y4Z0 139 aaKnown RBP7.46□□□□□ -1.22
RPA1-201ENST00000254719 RPLP1P05386 114 aaKnown RBP7.46□□□□□ -1.22
RPA1-201ENST00000254719 ATP5G3P48201 142 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 HINT1P49773 126 aaPredicted RBP7.46□□□□□ -1.22
RPA1-201ENST00000254719 PYGO2Q9BRQ0 406 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 UQCR10Q9UDW1 63 aa7.46□□□□□ -1.22
RPA1-201ENST00000254719 IGSF10Q6WRI0 2623 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 BMPR1BO00238 502 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 IGHV1-46P01743 117 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 NBEAP1P0C6P0 100 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 C1QTNF9P0C862 333 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 CBLN1P23435 193 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 S100A4P26447 101 aaKnown RBP7.45□□□□□ -1.22
RPA1-201ENST00000254719 RPL11P62913 178 aaKnown RBP7.45□□□□□ -1.22
RPA1-201ENST00000254719 SAPCD1Q5SSQ6 148 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 Q6ZS92 163 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 MUC15Q8N387 334 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 JKAMPQ9P055 326 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 DPM3Q9P2X0 92 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 ARHGAP32A7KAX9 2087 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 SPTBN4Q9H254 2564 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 PSMB11A5LHX3 300 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 PEX7O00628 323 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 SAA1P0DJI8 122 aaPredicted RBP7.45□□□□□ -1.22
RPA1-201ENST00000254719 GATA4P43694 442 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 SSBP2P81877 361 aaPredicted RBP7.45□□□□□ -1.22
RPA1-201ENST00000254719 RELBQ01201 579 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 EFNB3Q15768 340 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 FMC1Q96HJ9 113 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 SPTBN1Q01082 2364 aaKnown RBP7.45□□□□□ -1.22
RPA1-201ENST00000254719 SCO2A0A1W2PP80 73 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 H0Y8G0 127 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 PFN1P07737 140 aaKnown RBP7.45□□□□□ -1.22
RPA1-201ENST00000254719 DIAPH2-AS1Q14236 149 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 RASL11AQ6T310 242 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 ZNF414Q96IQ9 312 aa7.45□□□□□ -1.22
RPA1-201ENST00000254719 MRPL20Q9BYC9 149 aaKnown RBP7.45□□□□□ -1.22
RPA1-201ENST00000254719 IZUMO1RA6ND01 250 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 SLC17A3O00476 420 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 PPOXP50336 477 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 RELQ04864 619 aaPredicted RBP7.44□□□□□ -1.22
RPA1-201ENST00000254719 KLRB1Q12918 225 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 VAMP3Q15836 100 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 TMEM249Q2WGJ8 235 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 ZCCHC24Q8N2G6 241 aaKnown RBP7.44□□□□□ -1.22
RPA1-201ENST00000254719 FAM19A2Q8N3H0 131 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 STPG4Q8N801 248 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 EAF1Q96JC9 268 aaPredicted RBP7.44□□□□□ -1.22
RPA1-201ENST00000254719 RITA1Q96K30 269 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 MCRIP2Q9BUT9 160 aaKnown RBP7.44□□□□□ -1.22
RPA1-201ENST00000254719 TCRBV4S1A1TA0A5B7 111 aa7.44□□□□□ -1.22
RPA1-201ENST00000254719 OR5AL1P0C617 328 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms