RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 TRAV3A0A0B4J244 114 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 IGKCP01834 107 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 NDPQ00604 133 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 DEFB121Q5J5C9 76 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 ACTL10Q5JWF8 245 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 CHCHD1Q96BP2 118 aaKnown RBP7.14□□□□□ -1.27
PTCD3-201ENST00000254630 USMG5Q96IX5 58 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 C10orf126Q8N4M7 172 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 RNF182Q8N6D2 247 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 KIR3DL3Q8N743 410 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 GNB1LQ9BYB4 327 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 A8MXK9 166 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 LDLRAD4O15165 306 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 C10orf55Q5SWW7 151 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 RUSC1-AS1Q66K80 236 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 Q6ZS92 163 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 OR5A1Q8NGJ0 315 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 NXT2Q9NPJ8 142 aaKnown RBP7.14□□□□□ -1.27
PTCD3-201ENST00000254630 PLXNA4Q9HCM2 1894 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 SERF1AO75920 110 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 LAGE3Q14657 143 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 TSKUQ8WUA8 353 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 CHCHD5Q9BSY4 110 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 PLXNA2O75051 1894 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 WDR81Q562E7 1941 aa7.14□□□□□ -1.27
PTCD3-201ENST00000254630 IGKV1D-17A0A075B6S4 117 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 E7EQL1 145 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 K7ENP7 123 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 PSPNO60542 156 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 SH2D1AO60880 128 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 PSG1P11464 419 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 TEX38Q6PEX7 206 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 LCNL1Q6ZST4 164 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 ATP5L2Q7Z4Y8 100 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 FAM169BQ8N8A8 192 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 RNF166Q96A37 237 aaPredicted RBP7.13□□□□□ -1.27
PTCD3-201ENST00000254630 A0A1B0GWJ7 208 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 NDUFS8O00217 210 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 APOMO95445 188 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 ID3Q02535 119 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 PRR30Q53SZ7 412 aaPredicted RBP7.13□□□□□ -1.27
PTCD3-201ENST00000254630 LINC00518Q8N0U6 118 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 C5orf64Q2M2E5 130 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 EXOC3-AS1Q8N2X6 119 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 PIP4P2Q8N4L2 257 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 PHLDA1Q8WV24 401 aaPredicted RBP7.13□□□□□ -1.27
PTCD3-201ENST00000254630 GGTLC1Q9BX51 225 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 PMS2P5A8MQ11 134 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 GZMBP10144 247 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 TMEM155Q4W5P6 130 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 DPH3P1Q9H4G8 78 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 NLRC5Q86WI3 1866 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 TRAV12-3A0A0B4J271 114 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 C5orf63A6NC05 138 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 LINC00614P0C842 121 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 C21orf62-AS1Q17RA5 79 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 ZNF474Q6S9Z5 364 aaPredicted RBP7.13□□□□□ -1.27
PTCD3-201ENST00000254630 OCC1Q8TAD7 63 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 SDK1Q7Z5N4 2213 aa7.13□□□□□ -1.27
PTCD3-201ENST00000254630 TRBV6-6A0A0A6YYG2 114 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 INSP01308 110 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 FOXL2NBQ6ZUU3 175 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 BPESC1Q9GZL8 116 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 WDR83OSQ9Y284 106 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 IGHV3-64A0A075B6Q5 118 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 TRAV2A0A0B4J234 112 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 KLHDC3Q9BQ90 382 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 PPBPP02775 128 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 NIT1Q86X76 327 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 NRN1Q9NPD7 142 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 SUPT4H1P63272 117 aaKnown RBP7.12□□□□□ -1.27
PTCD3-201ENST00000254630 PSG3Q16557 428 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 Q5PR19 223 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 Q96MF0 132 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 TRGV1A0A0A0MS02 117 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 NPIPB5A8MRT5 1133 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 RNF223E7ERA6 249 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 RNF114Q9Y508 228 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 H0YIZ8 118 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 PAX2Q02962 417 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 TET1Q8NFU7 2136 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 MBD3L1Q8WWY6 194 aa7.12□□□□□ -1.27
PTCD3-201ENST00000254630 DOCK6Q96HP0 2047 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 NINQ8N4C6 2090 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 A6NNC1 897 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 NUP214P35658 2090 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-201ENST00000254630 NUP210Q8TEM1 1887 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-201ENST00000254630 SAA4P35542 130 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 SIGLEC9Q9Y336 463 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 ZNF815PA8K554 130 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 FCN3O75636 299 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 IGHV3-53P01767 116 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 CKS1BP61024 79 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 C9orf139Q6ZV77 190 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 SLC25A2Q9BXI2 301 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 GHRHP01286 108 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 A0A1B0GV90 55 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 ZNF138P52744 262 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 LINC00477Q96M19 166 aa7.11□□□□□ -1.27
PTCD3-201ENST00000254630 LINC00473A8K010 186 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms