RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CELA2BP08218 269 aaPredicted RBP10.59□□□□□ -0.71
VAMP4-201ENST00000236192 RPL39P5Q59GN2 51 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 LYPD6Q86Y78 171 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 H7C1H1 209 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 HIGD1BQ9P298 99 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 LOXL2Q9Y4K0 774 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 TCRBV4S1A1TA0A5B7 111 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 SLC25A20O43772 301 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 LAGE3Q14657 143 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 PMVKQ15126 192 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 OR11H6Q8NGC7 330 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 C20orf78Q9BR46 151 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 RAB1BQ9H0U4 201 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 NDUFV3P56181 108 aaKnown RBP10.58□□□□□ -0.72
VAMP4-201ENST00000236192 OSR1Q8TAX0 266 aaPredicted RBP10.58□□□□□ -0.72
VAMP4-201ENST00000236192 SCN5AQ14524 2016 aa10.58□□□□□ -0.72
VAMP4-201ENST00000236192 MPV17P39210 176 aa10.58□□□□□ -0.72
VAMP4-201ENST00000236192 TMEM78Q5T7P6 136 aa10.58□□□□□ -0.72
VAMP4-201ENST00000236192 LINC00479Q96M42 142 aa10.58□□□□□ -0.72
VAMP4-201ENST00000236192 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
VAMP4-201ENST00000236192 GLMPQ8WWB7 406 aa10.58□□□□□ -0.72
VAMP4-201ENST00000236192 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 JMJD8Q96S16 334 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 REPIN1Q9BWE0 567 aaKnown RBP10.57□□□□□ -0.72
VAMP4-201ENST00000236192 ALPK2Q86TB3 2170 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 FXYD2P54710 66 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 DOCK6Q96HP0 2047 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 C5orf63A6NC05 138 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 CFIP05156 583 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 CD69Q07108 199 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 ALPK3Q96L96 1907 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 MYMXA0A1B0GTQ4 84 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 IGKV1-39P01597 117 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 IGKV1D-39P04432 117 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 GLRXP35754 106 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 ALKBH6Q3KRA9 238 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 ORMDL2Q53FV1 153 aa10.57□□□□□ -0.72
VAMP4-201ENST00000236192 SLC25A39Q9BZJ4 359 aaPredicted RBP10.57□□□□□ -0.72
VAMP4-201ENST00000236192 TCRAP04437 139 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 CRYGSP22914 178 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 RPL11P62913 178 aaKnown RBP10.56□□□□□ -0.72
VAMP4-201ENST00000236192 CCL7P80098 99 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 TMEM42Q69YG0 159 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 PLXNA3P51805 1871 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 GFRA3O60609 400 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 CIRBPQ14011 172 aaKnown RBP10.56□□□□□ -0.72
VAMP4-201ENST00000236192 HCP5Q6MZN7 132 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 SLC25A53Q5H9E4 307 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 CALYQ9NYX4 217 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 FNDC1Q4ZHG4 1894 aaPredicted RBP10.56□□□□□ -0.72
VAMP4-201ENST00000236192 FREM3P0C091 2139 aa10.56□□□□□ -0.72
VAMP4-201ENST00000236192 IGKV1-6A0A0C4DH72 117 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 GGTLC3B5MD39 225 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 NPYP01303 97 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 NABP1Q96AH0 204 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 TRPM6Q9BX84 2022 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 RNF186Q9NXI6 227 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 NRXN2Q9P2S2 1712 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 NCR2O95944 276 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 CD27P26842 260 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 LHX8Q68G74 356 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 TMEM158Q8WZ71 300 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 PPP1R17O96001 155 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 IGHV3-48P01763 117 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 DUTP33316 252 aaKnown RBP10.55□□□□□ -0.72
VAMP4-201ENST00000236192 LYZL1Q6UWQ5 148 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 C1orf43Q9BWL3 253 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 SPRY3O43610 288 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 RPL27AP46776 148 aaKnown RBP10.55□□□□□ -0.72
VAMP4-201ENST00000236192 UFSP1Q6NVU6 142 aa10.55□□□□□ -0.72
VAMP4-201ENST00000236192 FRMD6-AS1P0C7T7 363 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 PRCDQ00LT1 54 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 TRBV25-1A0A075B6N4 114 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 PTH2Q96A98 100 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 FAM90A27PA6NNH2 459 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 DNAL4O96015 105 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 CCL3P10147 92 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 FOXA2Q9Y261 457 aaPredicted RBP10.54□□□□□ -0.72
VAMP4-201ENST00000236192 ZSWIM8A7E2V4 1837 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 ZNHIT1O43257 154 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 FAM168AQ92567 244 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 KIR2DL4Q99706 377 aa10.54□□□□□ -0.72
VAMP4-201ENST00000236192 A0A1W2PPI3 338 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 APELAP0DMC3 54 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 NRN1LQ496H8 165 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 AMN1Q8IY45 258 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 DKK2Q9UBU2 259 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 RNF114Q9Y508 228 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 CNTRLQ7Z7A1 2325 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 UPK2O00526 184 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 COL16A1Q07092 1604 aaPredicted RBP10.53□□□□□ -0.72
VAMP4-201ENST00000236192 CXCL10P02778 98 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 ZNF826PQ6ZT77 177 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 MDP1Q86V88 176 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 Q8N976 141 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 OR13A1Q8NGR1 328 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 DOCK8Q8NF50 2099 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 NDUFB3O43676 98 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms