RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 VAMP8Q9BV40 100 aa12.79□□□□□ -0.36
TMEM30A-201ENST00000230461 ARFGEF3Q5TH69 2177 aa12.79□□□□□ -0.36
TMEM30A-201ENST00000230461 PF4P02776 101 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 CD5P06127 495 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 MEOX2P50222 304 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 PAX8Q06710 450 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 SEPSECSQ9HD40 501 aaKnown RBP12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 TRAV5A0A0B4J249 113 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 GCGP01275 180 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 DDB2Q92466 427 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 CYYR1Q96J86 154 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 RPL23P62829 140 aaKnown RBP12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 PACRGQ96M98 296 aaPredicted RBP12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 AGMATQ9BSE5 352 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 IGHV1-69DA0A0B4J2H0 117 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 FNDC10F2Z333 226 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 IGHV1-69P01742 117 aa12.78□□□□□ -0.36
TMEM30A-201ENST00000230461 SPATA31B1PQ5VZV4 182 aa12.77□□□□□ -0.36
TMEM30A-201ENST00000230461 MAPK1IP1LQ8NDC0 245 aa12.77□□□□□ -0.36
TMEM30A-201ENST00000230461 EPDR1Q9UM22 224 aa12.77□□□□□ -0.36
TMEM30A-201ENST00000230461 RUSC1-AS1Q66K80 236 aa12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 FMC1Q96HJ9 113 aa12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 RAX2Q96IS3 184 aa12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 ATG101Q9BSB4 218 aa12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 MRPL18Q9H0U6 180 aaKnown RBP12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 SLC17A3O00476 420 aa12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 IGKV3-20P01619 116 aa12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 SLC50A1Q9BRV3 221 aa12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 PARD6GQ9BYG4 376 aaPredicted RBP12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 NDUFA4L2Q9NRX3 87 aa12.77□□□□□ -0.37
TMEM30A-201ENST00000230461 CD99P14209 185 aa12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 PHLDA3Q9Y5J5 127 aa12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 NUP210LQ5VU65 1888 aa12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 GSX1Q9H4S2 264 aaPredicted RBP12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 CNTFRP26992 372 aa12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 A0A087WWC5 75 aa12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 GGCTO75223 188 aaKnown RBP12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 PRSS1P07477 247 aa12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 GNG5P63218 68 aa12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 GOLT1BQ9Y3E0 138 aa12.76□□□□□ -0.37
TMEM30A-201ENST00000230461 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
TMEM30A-201ENST00000230461 PRORYQ9H606 182 aa12.75□□□□□ -0.37
TMEM30A-201ENST00000230461 IL36BQ9NZH7 164 aa12.75□□□□□ -0.37
TMEM30A-201ENST00000230461 CKS2P33552 79 aa12.75□□□□□ -0.37
TMEM30A-201ENST00000230461 IL15RAQ13261 267 aa12.75□□□□□ -0.37
TMEM30A-201ENST00000230461 SAMD13Q5VXD3 122 aa12.75□□□□□ -0.37
TMEM30A-201ENST00000230461 SPSB3Q6PJ21 355 aa12.75□□□□□ -0.37
TMEM30A-201ENST00000230461 C11orf42Q8N5U0 333 aa12.75□□□□□ -0.37
TMEM30A-201ENST00000230461 CHD8Q9HCK8 2581 aa12.75□□□□□ -0.37
TMEM30A-201ENST00000230461 FBLL1A6NHQ2 334 aaKnown RBP12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 ELOBQ15370 118 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 POU2AF1Q16633 256 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 DGAT2L7PQ6IED9 249 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 A0A1W2PRX2 142 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 IGHV2-5P01817 119 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 KIAA1644Q3SXP7 199 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 C1orf122Q6ZSJ8 110 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 TMEM116Q8NCL8 245 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 PSMB11A5LHX3 300 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 KIR3DL3Q8N743 410 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 SLC25A39Q9BZJ4 359 aaPredicted RBP12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 CIARTQ8N365 385 aaPredicted RBP12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 PEMTQ9UBM1 199 aa12.74□□□□□ -0.37
TMEM30A-201ENST00000230461 FAM159AQ6UWV7 190 aa12.73□□□□□ -0.37
TMEM30A-201ENST00000230461 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
TMEM30A-201ENST00000230461 IGHV3OR16-12A0A075B7B8 117 aa12.73□□□□□ -0.37
TMEM30A-201ENST00000230461 PMS2P5A8MQ11 134 aa12.73□□□□□ -0.37
TMEM30A-201ENST00000230461 FCER1GP30273 86 aa12.73□□□□□ -0.37
TMEM30A-201ENST00000230461 SYT8Q8NBV8 401 aa12.73□□□□□ -0.37
TMEM30A-201ENST00000230461 TRBV9A0A0B4J1U6 114 aa12.73□□□□□ -0.37
TMEM30A-201ENST00000230461 A0A1B0GW64 132 aa12.73□□□□□ -0.37
TMEM30A-201ENST00000230461 SRRM4A7MD48 611 aaKnown RBP12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 TMEM191AQ9H0A3 160 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 KLF2Q9Y5W3 355 aaPredicted RBP12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 CBLN1P23435 193 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 PLA2G5P39877 138 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 DAZAP2Q15038 168 aaPredicted RBP12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 Q96MF0 132 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 ZNF329Q86UD4 541 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 C11orf44Q8N8P7 122 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 OCC1Q8TAD7 63 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 TRBV7-1A0A0A6YYK4 115 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 LOC389332A0A1B0GUA5 103 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 ZNF98A6NK75 572 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 TMEM183BQ1AE95 376 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 TUBA4BQ9H853 241 aa12.72□□□□□ -0.37
TMEM30A-201ENST00000230461 PGPEP1LA6NFU8 196 aa12.71□□□□□ -0.37
TMEM30A-201ENST00000230461 HBBP68871 147 aa12.71□□□□□ -0.37
TMEM30A-201ENST00000230461 USMG5Q96IX5 58 aa12.71□□□□□ -0.37
TMEM30A-201ENST00000230461 NEU1Q99519 415 aa12.71□□□□□ -0.37
TMEM30A-201ENST00000230461 RPP21Q9H633 154 aaKnown RBP12.71□□□□□ -0.37
TMEM30A-201ENST00000230461 TRGC1P0CF51 173 aa12.71□□□□□ -0.37
TMEM30A-201ENST00000230461 SRIP30626 198 aa12.71□□□□□ -0.37
TMEM30A-201ENST00000230461 MAP1LC3CQ9BXW4 147 aa12.71□□□□□ -0.37
TMEM30A-201ENST00000230461 REG4Q9BYZ8 158 aa12.71□□□□□ -0.37
TMEM30A-201ENST00000230461 WT1-ASQ06250 92 aa12.71□□□□□ -0.38
TMEM30A-201ENST00000230461 TPSG1Q9NRR2 321 aa12.71□□□□□ -0.38
TMEM30A-201ENST00000230461 HSPB8Q9UJY1 196 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms