RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 IGHV4-39P01824 125 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 AMBPP02760 352 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 IGHV3-64A0A075B6Q5 118 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 IGKV2-40A0A087WW87 121 aaPredicted RBP8.68□□□□□ -1.02
TRPS1-201ENST00000220888 A0A1W2PRE2 83 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 BUB1B-PAK6H3BSN5 160 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 IGKV2D-40P01614 121 aaPredicted RBP8.68□□□□□ -1.02
TRPS1-201ENST00000220888 CCL1P22362 96 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 EVI2AP22794 236 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 PUSL1Q8N0Z8 303 aaKnown RBP8.68□□□□□ -1.02
TRPS1-201ENST00000220888 NABP1Q96AH0 204 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 PARD6GQ9BYG4 376 aaPredicted RBP8.68□□□□□ -1.02
TRPS1-201ENST00000220888 MS4A6AQ9H2W1 248 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 OVOL3O00110 214 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 ZNF138P52744 262 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 H2BFSP57053 126 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 DPM2O94777 84 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 CCL20P78556 96 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 TEX43Q6ZNM6 134 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 MRAPQ8TCY5 172 aa8.68□□□□□ -1.02
TRPS1-201ENST00000220888 SPAG8Q99932 426 aaPredicted RBP8.68□□□□□ -1.02
TRPS1-201ENST00000220888 TRAV9-1A0A075B6T8 112 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 IGKV1D-13A0A0B4J2D9 117 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 IGKV1-13P0DP09 117 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 MST1P26927 711 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 FOXG1P55316 489 aaPredicted RBP8.67□□□□□ -1.02
TRPS1-201ENST00000220888 PRR30Q53SZ7 412 aaPredicted RBP8.67□□□□□ -1.02
TRPS1-201ENST00000220888 POLEQ07864 2286 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 PMS2P5A8MQ11 134 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 J3QLI3 93 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 RUSC1-AS1Q66K80 236 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 LINC00114Q6XXX2 140 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 GGNQ86UU5 652 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 MYO16Q9Y6X6 1858 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 LDLRAD4O15165 306 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 PRTN3P24158 256 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 SLC25A48Q6ZT89 311 aaKnown RBP8.67□□□□□ -1.02
TRPS1-201ENST00000220888 FGFBP3Q8TAT2 258 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 TMEM190Q8WZ59 177 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 ZNFX1Q9P2E3 1918 aaKnown RBP8.67□□□□□ -1.02
TRPS1-201ENST00000220888 IMMP2LQ96T52 175 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 KLF17Q5JT82 389 aaPredicted RBP8.67□□□□□ -1.02
TRPS1-201ENST00000220888 RASL11AQ6T310 242 aa8.67□□□□□ -1.02
TRPS1-201ENST00000220888 SLC25A39Q9BZJ4 359 aaPredicted RBP8.67□□□□□ -1.02
TRPS1-201ENST00000220888 ALPK2Q86TB3 2170 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 MST1LQ2TV78 715 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 FAM90A2PQ658T7 463 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 LYZL4Q96KX0 146 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 ADAMTSL1Q8N6G6 1762 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 IGHG3P01860 377 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 CD300CQ08708 224 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 DMRTA1Q5VZB9 504 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 RNASE7Q9H1E1 156 aaKnown RBP8.66□□□□□ -1.02
TRPS1-201ENST00000220888 E7EQL1 145 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 RTBDNQ9BSG5 229 aaPredicted RBP8.66□□□□□ -1.02
TRPS1-201ENST00000220888 XCL2Q9UBD3 114 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 MIA3Q5JRA6 1907 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 M0R2P5 195 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 TMEM126AQ9H061 195 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 PRDM13Q9H4Q3 707 aa8.66□□□□□ -1.02
TRPS1-201ENST00000220888 MYO5AQ9Y4I1 1855 aaKnown RBP8.66□□□□□ -1.02
TRPS1-201ENST00000220888 IGHV1-69DA0A0B4J2H0 117 aa8.65□□□□□ -1.02
TRPS1-201ENST00000220888 IGHV1-69P01742 117 aa8.65□□□□□ -1.02
TRPS1-201ENST00000220888 TMEM249Q2WGJ8 235 aa8.65□□□□□ -1.02
TRPS1-201ENST00000220888 CD300EQ496F6 205 aaPredicted RBP8.65□□□□□ -1.02
TRPS1-201ENST00000220888 MESP1Q9BRJ9 268 aa8.65□□□□□ -1.02
TRPS1-201ENST00000220888 ATRXP46100 2492 aa8.65□□□□□ -1.02
TRPS1-201ENST00000220888 MPTX1A8MV57 137 aa8.65□□□□□ -1.02
TRPS1-201ENST00000220888 UBE2E1P51965 193 aa8.65□□□□□ -1.02
TRPS1-201ENST00000220888 TRAV13-1A0A0B4J241 112 aa8.65□□□□□ -1.02
TRPS1-201ENST00000220888 GAFA1Q96PS6 74 aa8.65□□□□□ -1.02
TRPS1-201ENST00000220888 CKAP5Q14008 2032 aa8.65□□□□□ -1.03
TRPS1-201ENST00000220888 SRSF4Q08170 494 aaKnown RBP8.65□□□□□ -1.03
TRPS1-201ENST00000220888 ZNF474Q6S9Z5 364 aaPredicted RBP8.65□□□□□ -1.03
TRPS1-201ENST00000220888 CA1P00915 261 aaPredicted RBP8.64□□□□□ -1.03
TRPS1-201ENST00000220888 PAQR4Q8N4S7 273 aaPredicted RBP8.64□□□□□ -1.03
TRPS1-201ENST00000220888 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 SCRT1Q9BWW7 348 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 EDA2RQ9HAV5 297 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 ATP5L2Q7Z4Y8 100 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 CD177Q8N6Q3 437 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
TRPS1-201ENST00000220888 RFNGQ9Y644 331 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 CADP27708 2225 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 TMEM238C9JI98 176 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 VCYO14598 125 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 ATXN8Q156A1 80 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 NCOR1O75376 2440 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 ZNF98A6NK75 572 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 LAGE3Q14657 143 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 EFNB3Q15768 340 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 MTURNQ8N3F0 131 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 PLEKHB2Q96CS7 222 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 REG4Q9BYZ8 158 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 LSM4Q9Y4Z0 139 aaKnown RBP8.64□□□□□ -1.03
TRPS1-201ENST00000220888 FLVCR1-AS1Q8TAF5 88 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 ST6GALNAC6Q969X2 333 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 C14orf144Q96I85 54 aa8.64□□□□□ -1.03
TRPS1-201ENST00000220888 LAMB2P55268 1798 aa8.63□□□□□ -1.03
TRPS1-201ENST00000220888 H0YJW9 148 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms