RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 YTHDF2Q9Y5A9 579 aaKnown RBP10.66□□□□□ -0.7
HDAC7-201ENST00000080059 GCGP01275 180 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 HLA-DRB1P01911 266 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 CKS2P33552 79 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 EFNA4P52798 201 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 C3orf36Q3SXR2 165 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 Q8TCH9 128 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 EPDR1Q9UM22 224 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 TRBV24-1A0A075B6N3 115 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 TRAV40A0A0B4J280 105 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 TCTAP57738 103 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 PSG9Q00887 426 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 DIAPH2-AS1Q14236 149 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 GFI1BQ5VTD9 330 aa10.66□□□□□ -0.7
HDAC7-201ENST00000080059 USP9YO00507 2555 aaPredicted RBP10.65□□□□□ -0.7
HDAC7-201ENST00000080059 A0A1W2PS18 150 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 VAMP3Q15836 100 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 ZNF726P1Q15940 193 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 TPTE2P1Q5T6R2 138 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 VMO1Q7Z5L0 202 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 SLX1AQ9BQ83 275 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 TMEM14BQ9NUH8 114 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 A0A1W2PPI3 338 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 M0R143 59 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 MGPP08493 103 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 RHOGP84095 191 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 BPESC1Q9GZL8 116 aa10.65□□□□□ -0.7
HDAC7-201ENST00000080059 SIAH2O43255 324 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 VDAC2P45880 294 aaPredicted RBP10.64□□□□□ -0.71
HDAC7-201ENST00000080059 MSMPQ1L6U9 139 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 TCF24Q7RTU0 167 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 TMEM219Q86XT9 240 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 OR10J6PQ8NGY7 276 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 NUP210LQ5VU65 1888 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 SRRM4A7MD48 611 aaKnown RBP10.64□□□□□ -0.71
HDAC7-201ENST00000080059 CX3CL1P78423 397 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 OR4B1Q8NGF8 309 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 PMS2P5A8MQ11 134 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 LEPROTL1O95214 131 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 CNTFRP26992 372 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 RAB9AP51151 201 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 HBBP68871 147 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 ATOH7Q8N100 152 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 TMEM242Q9NWH2 141 aa10.64□□□□□ -0.71
HDAC7-201ENST00000080059 TRBV9A0A0B4J1U6 114 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 GGCTO75223 188 aaKnown RBP10.63□□□□□ -0.71
HDAC7-201ENST00000080059 IGF2-ASQ6U949 168 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 ATG101Q9BSB4 218 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 SCRT1Q9BWW7 348 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 PTTG1IPP53801 180 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 FAM106AQ4KMX7 169 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 TEX36Q5VZQ5 186 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 BRD3OSQ6XYD6 125 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 ZNF600Q6ZNG1 722 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 FAM19A2Q8N3H0 131 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 TMEM116Q8NCL8 245 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 C5orf52A6NGY3 159 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 CD99P14209 185 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 C5orf64Q2M2E5 130 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 OR5AN1Q8NGI8 311 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
HDAC7-201ENST00000080059 SAPCD1Q5SSQ6 148 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 Q6ZPA2 131 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 EXOC3-AS1Q8N2X6 119 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 C8orf46Q8TAG6 207 aa10.63□□□□□ -0.71
HDAC7-201ENST00000080059 SH2D7A6NKC9 451 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-201ENST00000080059 IGKV3-20P01619 116 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 TMEM170AQ8WVE7 144 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 LINC00479Q96M42 142 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 OSTCQ9NRP0 149 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 HSPB8Q9UJY1 196 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 F11RQ9Y624 299 aaKnown RBP10.62□□□□□ -0.71
HDAC7-201ENST00000080059 USP9XQ93008 2570 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-201ENST00000080059 DDTP30046 118 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 PVRIGQ6DKI7 326 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 PARD6GQ9BYG4 376 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-201ENST00000080059 CHD3Q12873 2000 aaKnown RBP10.62□□□□□ -0.71
HDAC7-201ENST00000080059 ID1P41134 155 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 NCOR1P1Q9H4R4 102 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 RPP21Q9H633 154 aaKnown RBP10.62□□□□□ -0.71
HDAC7-201ENST00000080059 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
HDAC7-201ENST00000080059 A0A1B0GWJ7 208 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 PRTN3P24158 256 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 ADMP35318 185 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 PRR31Q5SQ13 230 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 DYNLRB2Q8TF09 96 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 TPSG1Q9NRR2 321 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 GOLT1BQ9Y3E0 138 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 SERF1AO75920 110 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 GSN-AS1Q9NRJ2 163 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 CTSZQ9UBR2 303 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 TRAV8-1A0A0A6YYK1 113 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 A0A1B0GUT8 65 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 UBE2CO00762 179 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 NDUFS7O75251 213 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 FOLR2P14207 255 aa10.61□□□□□ -0.71
HDAC7-201ENST00000080059 HIST1H1AQ02539 215 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms