RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 MmachcQ9CZD0 279 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Erv3Q9DAX3 200 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Ankrd65F6YK91 380 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Gm21746J3QMM6 180 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Fam240aJ3QNP9 97 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 P01675 107 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 P01676 107 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 P01677 107 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 P01678 107 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Ankrd33bQ3U0L2 486 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 SriQ6P069 198 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Tmem140Q8BGY5 185 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Cd226Q8K4F0 333 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Arrdc2Q9D668 407 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 AplnrQ9WV08 377 aa14.61□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Ldlrad2Q3V0V0 142 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 C1sbQ8CFG8 688 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Olfr1271Q8VG62 305 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Cep290Q6A078 2472 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Gm21310J3QQ23 232 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Prr23a3Q9CWP9 254 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 BC024063A0A1W2P7G7 749 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Wnt5aP22725 380 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Ly6fP35460 134 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Fam219bQ14DQ1 197 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Zfp975Q6NVD6 525 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Vstm2aQ8R0A6 236 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Srxn1Q9D975 136 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 SdhbQ9CQA3 282 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Olfr954Q9EQB6 314 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Ldb3Q9JKS4 723 aaKnown RBP14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Cbln1Q9R171 193 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Sfrp4Q9Z1N6 351 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Alpk2Q91ZB0 2144 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Cacna1bO55017 2327 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Zfp764E9QAP1 431 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Gm21788J3QNH3 180 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 C1ql4Q4ZJM9 238 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Mixl1Q9WUI0 231 aa14.6□□□□□ -0.07
Col17a1-201ENSMUST00000026045 B2mP01887 119 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 PkibQ04758 92 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Zcwpw2Q08EN7 125 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Psg22Q810J1 475 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Cnn3Q9DAW9 330 aaKnown RBP14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Kcne3Q9WTW2 103 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Elovl5Q8BHI7 299 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Tmem186Q9CR76 216 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Josd1Q9DBJ6 202 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 PikfyveQ9Z1T6 2097 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Vmn1r128L7N2B4 307 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 LfngO09010 378 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 TspoP50637 169 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Slc17a2Q5SZA1 478 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Lims1Q99JW4 325 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Fgf16Q9ESL8 207 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Dolpp1Q9JMF7 238 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Esp24A8R0V6 68 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Q8CF25 301 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 D1Ertd622eQ8VEB3 207 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Olfr1269Q8VEZ2 309 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 UmodQ91X17 642 aa14.59□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Zswim8Q3UHH1 1832 aaKnown RBP14.58□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Onecut2Q6XBJ3 505 aa14.58□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Cd200r4Q6XJV4 270 aa14.58□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Znf787Q8BIF9 381 aa14.58□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Immp2lQ8BPT6 175 aa14.58□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Gpr4Q8BUD0 365 aa14.58□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Ly6g6eQ8K1T6 166 aa14.58□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Olfr1453Q8VFX0 307 aa14.58□□□□□ -0.07
Col17a1-201ENSMUST00000026045 Fpr2O88536 351 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Ighg2cF6TQW2 404 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 P01864 335 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Chst1Q9EQC0 411 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 C1ql3Q9ESN4 255 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Eif3iQ9QZD9 325 aaKnown RBP14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Gm45785A0A1B0GT05 94 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Gm29776A0A286YEC0 699 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Gm12886B1AZM5 119 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Bet1lO35153 111 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Oprk1P33534 380 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Defa-rs12P50716 91 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Lsm11Q8BUV6 361 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Olfr1265Q8VEZ3 309 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Tmem225Q9D9S2 230 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Ssty1P13675 232 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Pcbp4P57724 403 aaKnown RBP14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Gm21943Q5FWD5 227 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Scnm1Q8K136 229 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 CorinQ9Z319 1113 aa14.58□□□□□ -0.08
Col17a1-201ENSMUST00000026045 VegfcP97953 415 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 SdhdQ9CXV1 159 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Gm28372A0A087WNV0 220 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Tcrg-V5A0A0G2JGV5 113 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 P01635 115 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Fgf5P15656 264 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Cks1bP61025 79 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Klf3Q60980 344 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Hist2h2beQ64524 126 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 Ammecr1lQ8JZZ6 310 aa14.57□□□□□ -0.08
Col17a1-201ENSMUST00000026045 4930583I09RikQ9D2E3 102 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms