RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	AMY1A	P04745	511 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	OR10J3	Q5JRS4	329 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	OR5AN1	Q8NGI8	311 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	IGKV1D-37	A0A075B6S9	117 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021		A0A1W2PN81	502 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	PLAU	P00749	431 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	ATP5I	P56385	69 aa	Predicted RBP	11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	ERH	P84090	104 aa	Known RBP	11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	GDF5OS	Q5U4N7	250 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	TMEM200B	Q69YZ2	307 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	CACNG8	Q8WXS5	425 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	KCNS1	Q96KK3	526 aa		11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.17	□□□□□ -0.62
PHGDH-233	ENST00000642021	C3orf36	Q3SXR2	165 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	PRR31	Q5SQ13	230 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	TMEM108	Q6UXF1	575 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	NIT1	Q86X76	327 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	FLYWCH2	Q96CP2	140 aa	Known RBP	11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	NUDT11	Q96G61	164 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	RITA1	Q96K30	269 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	ZNF586	Q9NXT0	402 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	IZUMO1R	A6ND01	250 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	FSTL3	O95633	263 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	TNFSF4	P23510	183 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	TMEM177	Q53S58	311 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	SGK494	Q96LW2	274 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	MRPL32	Q9BYC8	188 aa	Known RBP	11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	ZNF324	O75467	553 aa	Predicted RBP	11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	GOSR1	O95249	250 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	HLA-DQA1	P01909	254 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	APOA2	P02652	100 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	APCS	P02743	223 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	USF1	P22415	310 aa	Predicted RBP	11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	BATF	Q16520	125 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	ZNF329	Q86UD4	541 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	TSKU	Q8WUA8	353 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	MBD6	Q96DN6	1003 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	ZNF714	Q96N38	554 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	PAXX	Q9BUH6	204 aa		11.16	□□□□□ -0.62
PHGDH-233	ENST00000642021	PKDREJ	Q9NTG1	2253 aa		11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	COX7A2P2	O60397	106 aa		11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	REG1A	P05451	166 aa		11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	C3orf79	P0CE67	100 aa		11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	CTRL	P40313	264 aa		11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	GNG5	P63218	68 aa		11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	ZNF841	Q6ZN19	808 aa		11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	RNF2	Q99496	336 aa		11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	TPSG1	Q9NRR2	321 aa		11.15	□□□□□ -0.62
PHGDH-233	ENST00000642021	VWC2L	B2RUY7	222 aa		11.15	□□□□□ -0.63
PHGDH-233	ENST00000642021	RPL19	P84098	196 aa	Known RBP	11.15	□□□□□ -0.63
PHGDH-233	ENST00000642021	C10orf113	Q5VZT2	155 aa		11.15	□□□□□ -0.63
PHGDH-233	ENST00000642021	LEMD1	Q68G75	181 aa		11.15	□□□□□ -0.63
PHGDH-233	ENST00000642021	FXYD5	Q96DB9	178 aa		11.15	□□□□□ -0.63
PHGDH-233	ENST00000642021	CORT	O00230	105 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	IGLV2-23	P01705	113 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	PRR27	Q6MZM9	219 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	LYPD2	Q6UXB3	125 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	SPACA3	Q8IXA5	215 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	NUP35	Q8NFH5	326 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	TMEM167A	Q8TBQ9	72 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	C18orf32	Q8TCD1	76 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	WNT10A	Q9GZT5	417 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	AKAP13	Q12802	2813 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	PEX7	O00628	323 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	NTF3	P20783	257 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	MFAP2	P55001	183 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	TMEM30B	Q3MIR4	351 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	COX19	Q49B96	90 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	C19orf35	Q6ZS72	473 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	ABCA1	O95477	2261 aa		11.14	□□□□□ -0.63
PHGDH-233	ENST00000642021	TCRBV4S1A1T	A0A5B7	111 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	INS-IGF2	F8WCM5	200 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	ADIPOQ	Q15848	244 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	OR4C13	Q8NGP0	309 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	OR10X1	Q8NGY0	326 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	H1FX	Q92522	213 aa	Known RBP	11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	PPIAL4A	Q9Y536	164 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	GVINP1	Q7Z2Y8	2422 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	PCNX1	Q96RV3	2341 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	C22orf46	C9J442	243 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	GPR6	P46095	362 aa	Predicted RBP	11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	TFPI2	P48307	235 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	PRRX1	P54821	245 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	MRGPRG-AS1	Q2M3A8	158 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	SPATA45	Q537H7	98 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021		Q6ZS92	163 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	LINC00305	Q7Z4B0	112 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	VPS25	Q9BRG1	176 aa		11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.13	□□□□□ -0.63
PHGDH-233	ENST00000642021	DPRX	A6NFQ7	191 aa		11.12	□□□□□ -0.63
PHGDH-233	ENST00000642021	C17orf100	A8MU93	164 aa		11.12	□□□□□ -0.63
PHGDH-233	ENST00000642021	MOS	P00540	346 aa		11.12	□□□□□ -0.63
PHGDH-233	ENST00000642021	MEF2C	Q06413	473 aa	Predicted RBP	11.12	□□□□□ -0.63
PHGDH-233	ENST00000642021	TNXA	Q16473	311 aa		11.12	□□□□□ -0.63
PHGDH-233	ENST00000642021	TBR1	Q16650	682 aa		11.12	□□□□□ -0.63
PHGDH-233	ENST00000642021	LCN12	Q6JVE5	192 aa		11.12	□□□□□ -0.63
PHGDH-233	ENST00000642021	IGFL3	Q6UXB1	125 aa		11.12	□□□□□ -0.63
PHGDH-233	ENST00000642021	ATOH7	Q8N100	152 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms