RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 MIC13Q5XKP0 118 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.74□□□□□ -1.65
ATM-229ENST00000639953 FAM122CQ6P4D5 195 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 LINC00311Q8N616 119 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 CYB561D1Q8N8Q1 229 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 ZNF418Q8TF45 676 aaPredicted RBP4.74□□□□□ -1.65
ATM-229ENST00000639953 ISOC2Q96AB3 205 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 ZNF714Q96N38 554 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 SSX3Q99909 188 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 TMEM147Q9BVK8 224 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 PARD6GQ9BYG4 376 aaPredicted RBP4.74□□□□□ -1.65
ATM-229ENST00000639953 HIPK2Q9H2X6 1198 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 SLC25A22Q9H936 323 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 FOXA2Q9Y261 457 aaPredicted RBP4.74□□□□□ -1.65
ATM-229ENST00000639953 WDR83OSQ9Y284 106 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 SESN1Q9Y6P5 492 aa4.74□□□□□ -1.65
ATM-229ENST00000639953 A0A087X0M5 115 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 A0A1B0GX30 115 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 A0A1W2PPH5 198 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 NPFFO15130 113 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 KBTBD11O94819 623 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 IFNA5P01569 189 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 IFNA17P01571 189 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 IGLV1-47P01700 117 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 NQO2P16083 231 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 SAA4P35542 130 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 UBE2E1P51965 193 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 HILS1P60008 231 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 CD81P60033 236 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 BSXQ3C1V8 233 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 TMEM41BQ5BJD5 291 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 FFAR4Q5NUL3 377 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 EIF5AL1Q6IS14 154 aaKnown RBP4.73□□□□□ -1.65
ATM-229ENST00000639953 ZNF343Q6P1L6 599 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 C1orf122Q6ZSJ8 110 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 C9orf139Q6ZV77 190 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 STX12Q86Y82 276 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 TEX29Q8N6K0 151 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 TCTEX1D1Q8N7M0 179 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.73□□□□□ -1.65
ATM-229ENST00000639953 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.73□□□□□ -1.65
ATM-229ENST00000639953 OR52E5Q8NH55 327 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 OR4A16Q8NH70 328 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 OR2T6Q8NHC8 308 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 SCGB1C1Q8TD33 95 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 HIST1H2BAQ96A08 127 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 GNPNAT1Q96EK6 184 aaPredicted RBP4.73□□□□□ -1.65
ATM-229ENST00000639953 PSMG3Q9BT73 122 aaPredicted RBP4.73□□□□□ -1.65
ATM-229ENST00000639953 GGTLC1Q9BX51 225 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 HINT2Q9BX68 163 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 NPCDR1Q9BY65 106 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 EIF5A2Q9GZV4 153 aaKnown RBP4.73□□□□□ -1.65
ATM-229ENST00000639953 FNDC4Q9H6D8 234 aaPredicted RBP4.73□□□□□ -1.65
ATM-229ENST00000639953 HEYLQ9NQ87 328 aaPredicted RBP4.73□□□□□ -1.65
ATM-229ENST00000639953 GNG13Q9P2W3 67 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 LSM4Q9Y4Z0 139 aaKnown RBP4.73□□□□□ -1.65
ATM-229ENST00000639953 OR51B2Q9Y5P1 312 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 C2CD3Q4AC94 2353 aa4.73□□□□□ -1.65
ATM-229ENST00000639953 ANK2Q01484 3957 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 IGKV1D-37A0A075B6S9 117 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 IGHV2-26A0A0B4J1V2 119 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 TRAV5A0A0B4J249 113 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 UMAD1C9J7I0 102 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 H3BQ15 152 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 DFFBO76075 338 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 TOMM40O96008 361 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 IGHV4-59P01825 116 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 REG1AP05451 166 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 CRYBA1P05813 215 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 CXCL1P09341 107 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 CD24P25063 80 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 RAB5CP51148 216 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 RAB7AP51149 207 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 WT1-ASQ06250 92 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 SCGB2A2Q13296 93 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 ZNF266Q14584 549 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 PEA15Q15121 130 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 AKR1C8PQ5T2L2 129 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 ZNF429Q86V71 674 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 ZFP82Q8N141 532 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 COMMD1Q8N668 190 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 ZNF114Q8NC26 417 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 OR4P4Q8NGL7 312 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 OR4S2Q8NH73 311 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 OR9G1Q8NH87 305 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 SSMEM1Q8WWF3 244 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 C19orf24Q9BVV8 132 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 TM2D2Q9BX73 214 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 SLC35B3Q9H1N7 401 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 TMEM133Q9H2Q1 129 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 ZNF430Q9H8G1 570 aaPredicted RBP4.72□□□□□ -1.65
ATM-229ENST00000639953 NDUFA4L2Q9NRX3 87 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 KIAA1456Q9P272 454 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 TIMM9Q9Y5J7 89 aa4.72□□□□□ -1.65
ATM-229ENST00000639953 PUS1Q9Y606 427 aaKnown RBP eCLIP4.72□□□□□ -1.65
ATM-229ENST00000639953 IGHV3-21A0A0B4J1V1 117 aa4.71□□□□□ -1.66
ATM-229ENST00000639953 hCG_1809904A0A1W2PP81 198 aa4.71□□□□□ -1.66
ATM-229ENST00000639953 A0A1W2PPI3 338 aa4.71□□□□□ -1.66
ATM-229ENST00000639953 A0A1W2PR64 198 aa4.71□□□□□ -1.66
ATM-229ENST00000639953 A0A1W2PRV1 198 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms