RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 HERVK_113P61574 105 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 SAPCD1Q5SSQ6 148 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 ZNF664Q8N3J9 261 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 FMC1Q96HJ9 113 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 ZNF503-AS2A6NEH8 195 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 ABHD17AQ96GS6 310 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 PLSCR4Q9NRQ2 329 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 PFN1P07737 140 aaKnown RBP13.72□□□□□ -0.21
SCARB2-210ENST00000638567 PRR31Q5SQ13 230 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 PRB4P10163 310 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-210ENST00000638567 ZNF726P1Q15940 193 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 PRELID3AQ96N28 172 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 KLK15Q9H2R5 256 aa13.72□□□□□ -0.21
SCARB2-210ENST00000638567 KIAA1671Q9BY89 1806 aa13.71□□□□□ -0.21
SCARB2-210ENST00000638567 IGKV1D-17A0A075B6S4 117 aa13.71□□□□□ -0.21
SCARB2-210ENST00000638567 ERASQ7Z444 233 aa13.71□□□□□ -0.21
SCARB2-210ENST00000638567 ZNF257Q9Y2Q1 563 aa13.71□□□□□ -0.21
SCARB2-210ENST00000638567 NCOA6Q14686 2063 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-210ENST00000638567 GTF3C1Q12789 2109 aa13.71□□□□□ -0.21
SCARB2-210ENST00000638567 SOX21Q9Y651 276 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-210ENST00000638567 C7orf71A4D174 169 aa13.71□□□□□ -0.22
SCARB2-210ENST00000638567 C9JCJ5 164 aa13.71□□□□□ -0.22
SCARB2-210ENST00000638567 PF4V1P10720 104 aa13.71□□□□□ -0.22
SCARB2-210ENST00000638567 FABP2P12104 132 aa13.71□□□□□ -0.22
SCARB2-210ENST00000638567 PPP1R27Q86WC6 154 aa13.71□□□□□ -0.22
SCARB2-210ENST00000638567 ZNF414Q96IQ9 312 aa13.71□□□□□ -0.22
SCARB2-210ENST00000638567 ZNF207O43670 478 aaKnown RBP13.7□□□□□ -0.22
SCARB2-210ENST00000638567 LYRM7Q5U5X0 104 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 TMEM208Q9BTX3 173 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 LYNX1G3V0Z9 82 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 LYNX1P0DP58 116 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 CD24P25063 80 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 C1orf194Q5T5A4 169 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 TNFSF13O75888 250 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 PSMB2P49721 201 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 C21orf62Q9NYP8 219 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 AREGP15514 252 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 OR10J6PQ8NGY7 276 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 TMEM133Q9H2Q1 129 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 SLC25A15Q9Y619 301 aa13.7□□□□□ -0.22
SCARB2-210ENST00000638567 CIDEAO60543 219 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 MLANAQ16655 118 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 A0A1B0GUS0 222 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 DGAT2L7PQ6IED9 249 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 NUDT10Q8NFP7 164 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 NUDT11Q96G61 164 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 TRBV20OR9-2A0A075B6H5 130 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 A6NNC1 897 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 CHODLQ9H9P2 273 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 PCNX2A6NKB5 2137 aa13.69□□□□□ -0.22
SCARB2-210ENST00000638567 IGHV3-66A0A0C4DH42 116 aa13.68□□□□□ -0.22
SCARB2-210ENST00000638567 OR10J3Q5JRS4 329 aa13.68□□□□□ -0.22
SCARB2-210ENST00000638567 PLCE1Q9P212 2302 aa13.68□□□□□ -0.22
SCARB2-210ENST00000638567 FREM1Q5H8C1 2179 aa13.68□□□□□ -0.22
SCARB2-210ENST00000638567 TRAV9-2A0A087WT02 112 aa13.68□□□□□ -0.22
SCARB2-210ENST00000638567 TSKUQ8WUA8 353 aa13.68□□□□□ -0.22
SCARB2-210ENST00000638567 DCAF16Q9NXF7 216 aa13.68□□□□□ -0.22
SCARB2-210ENST00000638567 YLPM1P49750 1951 aaKnown RBP13.68□□□□□ -0.22
SCARB2-210ENST00000638567 SRSF6Q13247 344 aaKnown RBP13.67□□□□□ -0.22
SCARB2-210ENST00000638567 ZNF124Q15973 351 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 DNLZQ5SXM8 178 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 WDR86Q86TI4 376 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 CIARTQ8N365 385 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-210ENST00000638567 OTORQ9NRC9 128 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 PHLDA3Q9Y5J5 127 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 A1L4Q6 167 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 DLX1P56177 255 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 PLP1P60201 277 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-210ENST00000638567 NPPCP23582 126 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 HAPLN4Q86UW8 402 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 FBXL7Q9UJT9 491 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 TM4SF20Q53R12 229 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 BEND2Q8NDZ0 799 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 LYPD6BQ8NI32 183 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 DPF1Q92782 380 aa13.67□□□□□ -0.22
SCARB2-210ENST00000638567 IGKV3-15P01624 115 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 KIR3DL3Q8N743 410 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 IGKV1-16P04430 117 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 LINC00614P0C842 121 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 GPR183P32249 361 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 LCN12Q6JVE5 192 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 IGHV2-70P01814 119 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 NIT1Q86X76 327 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 SSC4DQ8WTU2 575 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 PLA2G2EQ9NZK7 142 aa13.66□□□□□ -0.22
SCARB2-210ENST00000638567 NUTF2P61970 127 aaKnown RBP13.65□□□□□ -0.22
SCARB2-210ENST00000638567 RNASE6Q93091 150 aaKnown RBP13.65□□□□□ -0.22
SCARB2-210ENST00000638567 HIST1H4GQ99525 98 aa13.65□□□□□ -0.22
SCARB2-210ENST00000638567 PEF1Q9UBV8 284 aaKnown RBP13.65□□□□□ -0.22
SCARB2-210ENST00000638567 MALRD1Q5VYJ5 2156 aa13.65□□□□□ -0.22
SCARB2-210ENST00000638567 RAB9AP51151 201 aa13.65□□□□□ -0.22
SCARB2-210ENST00000638567 ORMDL3Q8N138 153 aa13.65□□□□□ -0.22
SCARB2-210ENST00000638567 RNF125Q96EQ8 232 aa13.65□□□□□ -0.22
SCARB2-210ENST00000638567 IGHV3OR16-10A0A075B7F0 116 aa13.65□□□□□ -0.22
SCARB2-210ENST00000638567 TRAV8-6A0A0B4J262 113 aa13.65□□□□□ -0.22
SCARB2-210ENST00000638567 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms