RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	RPL7	P18124	248 aa	Known RBP	11.8	□□□□□ -0.52
NEDD4L-238	ENST00000635997	IBA57	Q5T440	356 aa	Known RBP	11.8	□□□□□ -0.52
NEDD4L-238	ENST00000635997	OR10J6P	Q8NGY7	276 aa		11.8	□□□□□ -0.52
NEDD4L-238	ENST00000635997	LDLRAD4	O15165	306 aa		11.8	□□□□□ -0.52
NEDD4L-238	ENST00000635997	NBR2	O15453	112 aa		11.8	□□□□□ -0.52
NEDD4L-238	ENST00000635997	GCG	P01275	180 aa		11.8	□□□□□ -0.52
NEDD4L-238	ENST00000635997	NUTF2	P61970	127 aa	Known RBP	11.8	□□□□□ -0.52
NEDD4L-238	ENST00000635997	COQ2	Q96H96	371 aa		11.8	□□□□□ -0.52
NEDD4L-238	ENST00000635997	WISP2	O76076	250 aa		11.8	□□□□□ -0.52
NEDD4L-238	ENST00000635997	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.79	□□□□□ -0.52
NEDD4L-238	ENST00000635997	NBEAP1	P0C6P0	100 aa		11.79	□□□□□ -0.52
NEDD4L-238	ENST00000635997	TMEM42	Q69YG0	159 aa		11.79	□□□□□ -0.52
NEDD4L-238	ENST00000635997	EEF1AKMT3	Q96AZ1	226 aa		11.79	□□□□□ -0.52
NEDD4L-238	ENST00000635997	SOD3	P08294	240 aa		11.79	□□□□□ -0.52
NEDD4L-238	ENST00000635997	HIST1H1A	Q02539	215 aa	Predicted RBP	11.79	□□□□□ -0.52
NEDD4L-238	ENST00000635997	SLC25A33	Q9BSK2	321 aa		11.79	□□□□□ -0.52
NEDD4L-238	ENST00000635997	CYP2G1P	Q6ZSU1	146 aa		11.79	□□□□□ -0.52
NEDD4L-238	ENST00000635997	PARL	Q9H300	379 aa		11.79	□□□□□ -0.52
NEDD4L-238	ENST00000635997	UPK2	O00526	184 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	GCHFR	P30047	84 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	COMP	P49747	757 aa	Predicted RBP	11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	RIG	Q13278	110 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	TMEM177	Q53S58	311 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	HEPN1	Q6WQI6	88 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	ANAPC16	Q96DE5	110 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	NAPSA	O96009	420 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	SUPT4H1	P63272	117 aa	Known RBP	11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	GCSAML	Q5JQS6	135 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	FAM162B	Q5T6X4	162 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997		A8MWL6	223 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	TRAV3	A0A0B4J244	114 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	VDAC2	P45880	294 aa	Predicted RBP	11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	CDPF1	Q6NVV7	123 aa		11.78	□□□□□ -0.52
NEDD4L-238	ENST00000635997	TRAV30	A0A087WSZ9	112 aa		11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997	IGHV2-26	A0A0B4J1V2	119 aa		11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997	TCRBV4S1A1T	A0A5B7	111 aa		11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997	TMEM189	A5PLL7	270 aa		11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997		B4DEV8	164 aa		11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997	ETV2	O00321	342 aa	Predicted RBP	11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997	WDR73	Q6P4I2	378 aa		11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997	TMEM158	Q8WZ71	300 aa		11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997	DDB2	Q92466	427 aa		11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997	BET1L	Q9NYM9	111 aa		11.77	□□□□□ -0.52
NEDD4L-238	ENST00000635997		C9JQL5	133 aa		11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997	IGHV1-8	P0DP01	117 aa		11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997	TWIST1	Q15672	202 aa		11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997		Q6ZR03	302 aa		11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997	KLHDC1	Q8N7A1	406 aa		11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997	PGLYRP4	Q96LB8	373 aa		11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997	NEU1	Q99519	415 aa		11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997	RANBP2	P49792	3224 aa	Known RBP	11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997		M0R2Z0	102 aa		11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997	MIR17HG	Q75NE6	70 aa		11.77	□□□□□ -0.53
NEDD4L-238	ENST00000635997	NDUFS7	O75251	213 aa		11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	RFNG	Q9Y644	331 aa		11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	GPX1	P07203	203 aa		11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	TMEM116	Q8NCL8	245 aa		11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	HIST3H2BB	Q8N257	126 aa		11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	C2orf88	Q9BSF0	95 aa		11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	DKK1	O94907	266 aa		11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	REL	Q04864	619 aa	Predicted RBP	11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	FAM74A4	Q5TZK3	123 aa		11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	ZNF329	Q86UD4	541 aa		11.76	□□□□□ -0.53
NEDD4L-238	ENST00000635997	LINC00473	A8K010	186 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	CD5	P06127	495 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	CXCL1	P09341	107 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	ATP5G3	P48201	142 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	HINT1	P49773	126 aa	Predicted RBP	11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	RHOG	P84095	191 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	ID3	Q02535	119 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997		Q6P435	159 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	LHFPL1	Q86WI0	220 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	TMEM183A	Q8IXX5	376 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	HIST1H2BL	Q99880	126 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997		H3BUX3	64 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	OBSL1	O75147	1896 aa		11.75	□□□□□ -0.53
NEDD4L-238	ENST00000635997	EREG	O14944	169 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	GATA3	P23771	443 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	DLX6	P56179	175 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	VMO1	Q7Z5L0	202 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	OR8A1	Q8NGG7	326 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	GLMP	Q8WWB7	406 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	C15orf61	A6NNL5	157 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	QRFP	P83859	136 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	FOXL2NB	Q6ZUU3	175 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	GAFA1	Q96PS6	74 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997		C9JCJ5	164 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	BBC3	Q96PG8	261 aa	Predicted RBP	11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	HSPB9	Q9BQS6	159 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	GSX1	Q9H4S2	264 aa	Predicted RBP	11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	CENPW	Q5EE01	88 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	ZNF841	Q6ZN19	808 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	OR52E5	Q8NH55	327 aa		11.74	□□□□□ -0.53
NEDD4L-238	ENST00000635997	APCS	P02743	223 aa		11.73	□□□□□ -0.53
NEDD4L-238	ENST00000635997	CLDND2	Q8NHS1	167 aa		11.73	□□□□□ -0.53

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