RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 IGHV3-23P01764 117 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 OR9G9P0C7N8 305 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 PYYP10082 97 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 TMEM171Q8WVE6 324 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 CEACAM4O75871 244 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 CELA3BP08861 270 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 RPP25LQ8N5L8 163 aaKnown RBP9.71□□□□□ -0.85
COL11A1-211ENST00000635193 ERG28Q9UKR5 140 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 LOC285556D6RIA3 1793 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 GREB1Q4ZG55 1949 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 IGLV3-32A0A0A0MS00 114 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 SRSF7Q16629 238 aaKnown RBP eCLIP9.71□□□□□ -0.85
COL11A1-211ENST00000635193 FAM106AQ4KMX7 169 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 GTSCR1Q86UQ5 136 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 VWCEQ96DN2 955 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 IMMP1LQ96LU5 166 aa9.71□□□□□ -0.85
COL11A1-211ENST00000635193 CACNA1DQ01668 2161 aa9.71□□□□□ -0.86
COL11A1-211ENST00000635193 MST1LQ2TV78 715 aa9.71□□□□□ -0.86
COL11A1-211ENST00000635193 ATXN8Q156A1 80 aa9.71□□□□□ -0.86
COL11A1-211ENST00000635193 PSG3Q16557 428 aa9.71□□□□□ -0.86
COL11A1-211ENST00000635193 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
COL11A1-211ENST00000635193 MORN2Q502X0 79 aa9.71□□□□□ -0.86
COL11A1-211ENST00000635193 FGF11Q92914 225 aa9.71□□□□□ -0.86
COL11A1-211ENST00000635193 IGHV2OR16-5A0A0B4J2B6 119 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 C9JQL5 133 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 LYL1P12980 280 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 TDGF1P13385 188 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 CRYGSP22914 178 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 RRN3P1Q2M238 152 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 EP300Q09472 2414 aaPredicted RBP9.7□□□□□ -0.86
COL11A1-211ENST00000635193 IGHV2-5P01817 119 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 HGFACQ04756 655 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 RSPO3Q9BXY4 272 aaPredicted RBP9.7□□□□□ -0.86
COL11A1-211ENST00000635193 RIF1Q5UIP0 2472 aaKnown RBP9.7□□□□□ -0.86
COL11A1-211ENST00000635193 IGLV3-12A0A075B6K2 115 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 IGHV1-2P23083 117 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 FAM90A2PQ658T7 463 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 TREML4Q6UXN2 200 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 C1orf162Q8NEQ5 155 aaPredicted RBP9.7□□□□□ -0.86
COL11A1-211ENST00000635193 RNF115Q9Y4L5 304 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 IGHV3-66A0A0C4DH42 116 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 FAM90A9PA6NNJ1 464 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 FABP5P3A8MUU1 101 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 PLNP26678 52 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 ORMDL2Q53FV1 153 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 NMSQ5H8A3 153 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 YAE1D1Q9NRH1 226 aa9.7□□□□□ -0.86
COL11A1-211ENST00000635193 MRPS18CQ9Y3D5 142 aaKnown RBP9.7□□□□□ -0.86
COL11A1-211ENST00000635193 MRPL14Q6P1L8 145 aaKnown RBP9.69□□□□□ -0.86
COL11A1-211ENST00000635193 C21orf62Q9NYP8 219 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 LINC00312Q9Y6C7 94 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 DOCK3Q8IZD9 2030 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 DUTP33316 252 aaKnown RBP9.69□□□□□ -0.86
COL11A1-211ENST00000635193 PLSCR4Q9NRQ2 329 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 SPANXA1Q9NS26 97 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 TCRBV4S1A1TA0A5B7 111 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 RBMY1BA6NDE4 496 aaKnown RBP9.69□□□□□ -0.86
COL11A1-211ENST00000635193 RBMY1EA6NEQ0 496 aaKnown RBP9.69□□□□□ -0.86
COL11A1-211ENST00000635193 RBMY1DP0C7P1 496 aaKnown RBP9.69□□□□□ -0.86
COL11A1-211ENST00000635193 RBMY1A1P0DJD3 496 aaKnown RBP9.69□□□□□ -0.86
COL11A1-211ENST00000635193 RBMY1CP0DJD4 496 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 CNTFRP26992 372 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 CD69Q07108 199 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 RTN4RL2Q86UN3 420 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 RNF182Q8N6D2 247 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 IGKV1-27A0A075B6S5 117 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 IGHV3OR16-12A0A075B7B8 117 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 IGHV3-49A0A0A0MS15 119 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 A0A1B0GWJ7 208 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 CDKN1AP38936 164 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 SLC25A48Q6ZT89 311 aaKnown RBP9.69□□□□□ -0.86
COL11A1-211ENST00000635193 NPFFR1Q9GZQ6 430 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 PSG8Q9UQ74 426 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 LY96Q9Y6Y9 160 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 SNRNP200O75643 2136 aaKnown RBP9.69□□□□□ -0.86
COL11A1-211ENST00000635193 QRFPP83859 136 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 BMPERQ8N8U9 685 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 RAX2Q96IS3 184 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 SLC25A15Q9Y619 301 aa9.69□□□□□ -0.86
COL11A1-211ENST00000635193 KIF26BQ2KJY2 2108 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 EVI2AP22794 236 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 PRCDQ00LT1 54 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 KLF17Q5JT82 389 aaPredicted RBP9.68□□□□□ -0.86
COL11A1-211ENST00000635193 GGTLC1Q9BX51 225 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 FBXL7Q9UJT9 491 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 HEATR5BQ9P2D3 2071 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 FAM231BA6NCW3 169 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 IGLV3-19P01714 112 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 TFF1P04155 84 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 FGFBP3Q8TAT2 258 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 B9A039 149 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 TNFRSF6BO95407 300 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 TMPRSS3P57727 454 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 RPRMLQ8N4K4 120 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 ASCL2Q99929 193 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 LHX2P50458 406 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 CD300EQ496F6 205 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms