RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 TRAV30A0A087WSZ9 112 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 A6NHS1 94 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 IGLC1P0CG04 106 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 IAPPP10997 89 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 TFPI2P48307 235 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 FAM90A2PQ658T7 463 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 ETFRF1Q6IPR1 90 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 NPIPB3Q92617 1050 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 MAGT1Q9H0U3 335 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 VSIRQ9H7M9 311 aa10.58□□□□□ -0.72
PNKP-223ENST00000629179 OR4C46A6NHA9 309 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 SCGB2A1O75556 95 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 ADAP1O75689 374 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 IFNA4P05014 189 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 OR4E1P0C645 316 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 ANXA7P20073 488 aaKnown RBP10.57□□□□□ -0.72
PNKP-223ENST00000629179 NPPCP23582 126 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 OR10J1P30954 320 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 DHRS2Q13268 280 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 ODF3L2Q3SX64 289 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 TCF24Q7RTU0 167 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 LYG2Q86SG7 212 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 GBGT1Q8N5D6 347 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 OR1S2Q8NGQ3 325 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 ACY3Q96HD9 319 aa10.57□□□□□ -0.72
PNKP-223ENST00000629179 FAM90A26D6RGX4 464 aa10.56□□□□□ -0.72
PNKP-223ENST00000629179 LYRM1O43325 122 aa10.56□□□□□ -0.72
PNKP-223ENST00000629179 DFFBO76075 338 aa10.56□□□□□ -0.72
PNKP-223ENST00000629179 YPEL3P61236 119 aaPredicted RBP10.56□□□□□ -0.72
PNKP-223ENST00000629179 FAM110AQ9BQ89 295 aa10.56□□□□□ -0.72
PNKP-223ENST00000629179 LOC102724200A0A096LPH7 203 aaPredicted RBP10.55□□□□□ -0.72
PNKP-223ENST00000629179 MPTX1A8MV57 137 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 SYNGR2O43760 224 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 MED6O75586 246 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 CRYBB3P26998 211 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 BMI1P35226 326 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 ATP5IP56385 69 aaPredicted RBP10.55□□□□□ -0.72
PNKP-223ENST00000629179 CNPY1Q3B7I2 92 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 C4orf46Q504U0 113 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 WFDC3Q8IUB2 231 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 Q8WTZ3 238 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 METTL26Q96S19 204 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 GGTLC1Q9BX51 225 aa10.55□□□□□ -0.72
PNKP-223ENST00000629179 PAIP2BQ9ULR5 123 aaKnown RBP10.55□□□□□ -0.72
PNKP-223ENST00000629179 A0A1W2PS18 150 aa10.54□□□□□ -0.72
PNKP-223ENST00000629179 WRBO00258 174 aa10.54□□□□□ -0.72
PNKP-223ENST00000629179 GPX4P36969 197 aaPredicted RBP10.54□□□□□ -0.72
PNKP-223ENST00000629179 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
PNKP-223ENST00000629179 GAMTQ14353 236 aa10.54□□□□□ -0.72
PNKP-223ENST00000629179 ZNF124Q15973 351 aa10.54□□□□□ -0.72
PNKP-223ENST00000629179 APRG1Q8IVJ8 170 aa10.54□□□□□ -0.72
PNKP-223ENST00000629179 COQ8AQ8NI60 647 aa10.54□□□□□ -0.72
PNKP-223ENST00000629179 MUC7Q8TAX7 377 aa10.54□□□□□ -0.72
PNKP-223ENST00000629179 EDA2RQ9HAV5 297 aa10.54□□□□□ -0.72
PNKP-223ENST00000629179 C3orf84H3BNL1 204 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 DNASE2O00115 360 aaPredicted RBP10.53□□□□□ -0.72
PNKP-223ENST00000629179 IFNA21P01568 189 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 TCRBP04435 133 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 CD5P06127 495 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 RD3LP0DJH9 198 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 P2RY1P47900 373 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 RAB11AP62491 216 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 PAFAH1B2P68402 229 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 SLC35E1Q96K37 410 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 CIB3Q96Q77 187 aaPredicted RBP10.53□□□□□ -0.72
PNKP-223ENST00000629179 CCDC32Q9BV29 185 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 C20orf85Q9H1P6 137 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 MS4A6AQ9H2W1 248 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 TMEM231Q9H6L2 316 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 U3KQE9 123 aa10.53□□□□□ -0.72
PNKP-223ENST00000629179 TRAV6A0A075B6T7 132 aa10.52□□□□□ -0.73
PNKP-223ENST00000629179 TOMM40O96008 361 aa10.52□□□□□ -0.73
PNKP-223ENST00000629179 IL4P05112 153 aa10.52□□□□□ -0.73
PNKP-223ENST00000629179 HNRNPCP07910 306 aaKnown RBP eCLIP10.52□□□□□ -0.731e-12■■■■□ 23.5
PNKP-223ENST00000629179 PSG1P11464 419 aa10.52□□□□□ -0.73
PNKP-223ENST00000629179 RPL35AP18077 110 aaKnown RBP10.52□□□□□ -0.73
PNKP-223ENST00000629179 ID3Q02535 119 aa10.52□□□□□ -0.73
PNKP-223ENST00000629179 USF2Q15853 346 aaPredicted RBP10.52□□□□□ -0.73
PNKP-223ENST00000629179 SPANXN5Q5MJ07 72 aa10.52□□□□□ -0.73
PNKP-223ENST00000629179 LINC00299Q6ZSB3 139 aa10.52□□□□□ -0.73
PNKP-223ENST00000629179 NARS2Q96I59 477 aaKnown RBP10.52□□□□□ -0.73
PNKP-223ENST00000629179 MAP6D1Q9H9H5 199 aa10.52□□□□□ -0.73
PNKP-223ENST00000629179 RABAC1Q9UI14 185 aa10.52□□□□□ -0.73
PNKP-223ENST00000629179 IGKV1D-37A0A075B6S9 117 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 ZFP92A6NM28 416 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 H3BP45 60 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 CMC4P56277 68 aaPredicted RBP10.51□□□□□ -0.73
PNKP-223ENST00000629179 POLR2GP62487 172 aaKnown RBP eCLIP10.51□□□□□ -0.73
PNKP-223ENST00000629179 RPP30P78346 268 aaKnown RBP10.51□□□□□ -0.73
PNKP-223ENST00000629179 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 STXBP6Q8NFX7 210 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 OR51G1Q8NGK1 321 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 OR4D5Q8NGN0 318 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 MITD1Q8WV92 249 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 S100ZQ8WXG8 99 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
PNKP-223ENST00000629179 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
PNKP-223ENST00000629179 LYL1P12980 280 aa10.5□□□□□ -0.73
PNKP-223ENST00000629179 NKX2-1P43699 371 aaPredicted RBP10.5□□□□□ -0.73
PNKP-223ENST00000629179 ZNF90Q03938 601 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms