RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 ADORA2A-AS1P86434 159 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 HES3Q5TGS1 186 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 ZNF627Q7L945 461 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 RNF128Q8TEB7 428 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 WIPF2Q8TF74 440 aaPredicted RBP7.56□□□□□ -1.2
USB1-216ENST00000624720 TMEM70Q9BUB7 260 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 NAA60Q9H7X0 242 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 ACACAQ13085 2346 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 NSG1A0A0A6YYJ2 146 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 OOSP1A8MZH6 123 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 HLA-DOBP13765 273 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 TRPT1Q86TN4 253 aaKnown RBP7.56□□□□□ -1.2
USB1-216ENST00000624720 C10orf126Q8N4M7 172 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 OR1F12Q8NHA8 337 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 TIMD4Q96H15 378 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 IFI27L2Q9H2X8 130 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 FZR1Q9UM11 496 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 DSPP15924 2871 aaKnown RBP7.56□□□□□ -1.2
USB1-216ENST00000624720 NBASA2RRP1 2371 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 IGHV3-15A0A0B4J1V0 119 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 LRRC30A6NM36 301 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 RIIAD1A6NNX1 92 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 CRLF1O75462 422 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 COX8AP10176 69 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 RBMXP38159 391 aaKnown RBP7.55□□□□□ -1.2
USB1-216ENST00000624720 TMEM136Q6ZRR5 245 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 IL17RELQ6ZVW7 336 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 OR4X2Q8NGF9 303 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 COA3Q9Y2R0 106 aaPredicted RBP7.55□□□□□ -1.2
USB1-216ENST00000624720 ATMQ13315 3056 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 SPTBN4Q9H254 2564 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 FAM236AA0A1B0GUQ0 79 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 FAM236BA0A1B0GV22 79 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 NTN3O00634 580 aaPredicted RBP7.55□□□□□ -1.2
USB1-216ENST00000624720 GP1BBP13224 206 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 HSPE1P61604 102 aaKnown RBP7.55□□□□□ -1.2
USB1-216ENST00000624720 DTX2Q86UW9 622 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 HOGA1Q86XE5 327 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 GATD1Q8NB37 220 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 PRORYQ9H606 182 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 JPT2Q9H910 190 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 PRO0461Q9UI25 63 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 APC2O95996 2303 aa7.55□□□□□ -1.2
USB1-216ENST00000624720 A0A1B0GTH9 108 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 C2orf70A6NJV1 201 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 FOLR3P41439 243 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 FAM27E3Q08E93 113 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 OXLD1Q5BKU9 147 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 DMRTC1Q5HYR2 192 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 C9orf153Q5TBE3 101 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 GAPTQ8N292 157 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 TMEM230Q96A57 120 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 SPTA1P02549 2419 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 SNURFLB1AK76 121 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 PITX3O75364 302 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 RBP4P02753 201 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 CCL3P10147 92 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 PTGDSP41222 190 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 RPL18Q07020 188 aaKnown RBP7.54□□□□□ -1.2
USB1-216ENST00000624720 Q6ZT83 130 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 STHQ8IWL8 128 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 FBXL14Q8N1E6 418 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 NFAM1Q8NET5 270 aaPredicted RBP7.54□□□□□ -1.2
USB1-216ENST00000624720 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 DNAJC13O75165 2243 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 MED13Q9UHV7 2174 aa7.54□□□□□ -1.2
USB1-216ENST00000624720 TMED7-TICAM2A0A0A6YYA0 188 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 TRBV9A0A0B4J1U6 114 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 ZNF732B4DXR9 585 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 GGTLC3B5MD39 225 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 PGLYRP1O75594 196 aaPredicted RBP7.53□□□□□ -1.2
USB1-216ENST00000624720 ZFAND5O76080 213 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 NMUP48645 174 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 SUPT4H1P63272 117 aaKnown RBP7.53□□□□□ -1.2
USB1-216ENST00000624720 CX3CL1P78423 397 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 Q5XG85 94 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 EXOC3-AS1Q8N2X6 119 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 CARD19Q96LW7 228 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 HES7Q9BYE0 225 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 TMEM222Q9H0R3 208 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 C5orf66Q9H5L9 145 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 NCKAP5O14513 1909 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 TRAV9-1A0A075B6T8 112 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 NDUFB2O95178 105 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 CSN1S1P47710 185 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 RPL31P62899 125 aaKnown RBP7.53□□□□□ -1.2
USB1-216ENST00000624720 SPINK14Q6IE38 97 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 MRPL14Q6P1L8 145 aaKnown RBP7.53□□□□□ -1.2
USB1-216ENST00000624720 NFE4Q86UQ8 179 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 RDH5Q92781 318 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 C20orf173Q96LM9 149 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 C1RLQ9NZP8 487 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 OR2W1Q9Y3N9 320 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 MPC1Q9Y5U8 109 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 SPINK2P20155 84 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 ZNF90Q03938 601 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 FHL1Q13642 323 aa7.53□□□□□ -1.2
USB1-216ENST00000624720 PCOLCEQ15113 449 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms