RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SACSQ9NZJ4 4579 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 TRDV1A0A1B0GX56 115 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 TMEM30CPA0ZSE6 113 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 PSMB11A5LHX3 300 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 B4DEV8 164 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 H0Y980 276 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 H7BYZ3 331 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 GAPDHP04406 335 aaKnown RBP6.73□□□□□ -1.33
GPC6-202ENST00000617456 AMY1AP04745 511 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 AMY2AP04746 511 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 TPT1P13693 172 aaKnown RBP6.73□□□□□ -1.33
GPC6-202ENST00000617456 TFPI2P48307 235 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 TAS2R19P59542 299 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 PLP1P60201 277 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 ST3GAL4Q11206 333 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 DHRS2Q13268 280 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 ATXN7L3Q14CW9 347 aaPredicted RBP6.73□□□□□ -1.33
GPC6-202ENST00000617456 ELOBQ15370 118 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 SMN1Q16637 294 aaKnown RBP6.73□□□□□ -1.33
GPC6-202ENST00000617456 LY6G6FQ5SQ64 297 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 CASC10Q5T4H9 136 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 ZNF497Q6ZNH5 498 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 H2BFWTQ7Z2G1 175 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 SUMF2Q8NBJ7 301 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 OR13A1Q8NGR1 328 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 MARCH1Q8TCQ1 289 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 MRPL16Q9NX20 251 aaKnown RBP6.73□□□□□ -1.33
GPC6-202ENST00000617456 TAS2R4Q9NYW5 299 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 UQCR10Q9UDW1 63 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 ZNF580Q9UK33 172 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 ERG28Q9UKR5 140 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 MOB4Q9Y3A3 225 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 RFNGQ9Y644 331 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 DNAH7Q8WXX0 4024 aa6.73□□□□□ -1.33
GPC6-202ENST00000617456 FXYD6-FXYD2A0A087WZ82 144 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 TRBV5-7A0A0A0MS05 114 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 E5RGE8 158 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 GEMIN2O14893 280 aaKnown RBP6.72□□□□□ -1.33
GPC6-202ENST00000617456 ARPC1BO15143 372 aaKnown RBP6.72□□□□□ -1.33
GPC6-202ENST00000617456 OR7C1O76099 320 aaPredicted RBP6.72□□□□□ -1.33
GPC6-202ENST00000617456 PET100P0DJ07 73 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 FUT3P21217 361 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 IL3RAP26951 378 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 ECI1P42126 302 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 ZNF137PP52743 207 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 UBE2KP61086 200 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 RPS11P62280 158 aaKnown RBP eCLIP6.72□□□□□ -1.33
GPC6-202ENST00000617456 PSG5Q15238 335 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 SPHARQ15513 63 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 SRSF7Q16629 238 aaKnown RBP eCLIP6.72□□□□□ -1.33
GPC6-202ENST00000617456 CD300EQ496F6 205 aaPredicted RBP6.72□□□□□ -1.33
GPC6-202ENST00000617456 GLT8D1Q68CQ7 371 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 TOMM20LQ6UXN7 152 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 TMEM182Q6ZP80 229 aaPredicted RBP6.72□□□□□ -1.33
GPC6-202ENST00000617456 LYPD6Q86Y78 171 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 TOMM5Q8N4H5 51 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 TCTEX1D1Q8N7M0 179 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 KLHL30-AS1Q8NEE0 82 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 OR4B1Q8NGF8 309 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 OR1N2Q8NGR9 330 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 FRZBQ92765 325 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 PGLYRP3Q96LB9 341 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 FXYD6Q9H0Q3 95 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 TAF9BQ9HBM6 251 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 TRAPPC2LQ9UL33 140 aa6.72□□□□□ -1.33
GPC6-202ENST00000617456 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
GPC6-202ENST00000617456 HUWE1Q7Z6Z7 4374 aaKnown RBP6.71□□□□□ -1.33
GPC6-202ENST00000617456 A0A1W2PPI3 338 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 UBE2QL1A1L167 161 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 MPPED1O15442 326 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 SPINT2O43291 252 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 IGHG2P01859 326 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 IGLC1P0CG04 106 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 PSG1P11464 419 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 LYL1P12980 280 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 MYCNOSP40205 109 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 OR3A4PP47883 348 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 SLC35B1P78383 322 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 AKR1C1Q04828 323 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 PIGYQ3MUY2 71 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 OR52B4Q8NGK2 314 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 PLPPR1Q8TBJ4 325 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 ST6GALNAC6Q969X2 333 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 SCRT1Q9BWW7 348 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 ATG5Q9H1Y0 275 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 LIN7CQ9NUP9 197 aaKnown RBP6.71□□□□□ -1.34
GPC6-202ENST00000617456 LINC00527Q9UJ94 153 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.34
GPC6-202ENST00000617456 SIRT4Q9Y6E7 314 aaPredicted RBP6.71□□□□□ -1.34
GPC6-202ENST00000617456 DSCAML1Q8TD84 2053 aa6.71□□□□□ -1.34
GPC6-202ENST00000617456 TRBV6-7A0A0A0MS04 114 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 TRAV14DV4A0A0A6YYC5 116 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 IGHV1-3A0A0C4DH29 117 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 LCE6AA0A183 80 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 A0A1B0GU03 582 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 RAB27BO00194 218 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 HSD17B6O14756 317 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 CDS2O95674 445 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 TRGC2P03986 189 aa6.7□□□□□ -1.34
GPC6-202ENST00000617456 SERPINE2P07093 398 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms