RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, human

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-223	ENST00000616010	CYP2G1P	Q6ZSU1	146 aa		18.25	■□□□□ 0.51
CCND3-223	ENST00000616010	BPIFC	Q8NFQ6	507 aa		18.25	■□□□□ 0.51
CCND3-223	ENST00000616010	KLK15	Q9H2R5	256 aa		18.25	■□□□□ 0.51
CCND3-223	ENST00000616010	SLC45A2	Q9UMX9	530 aa		18.25	■□□□□ 0.51
CCND3-223	ENST00000616010	ZNF705E	A8MWA4	302 aa	Predicted RBP	18.25	■□□□□ 0.51
CCND3-223	ENST00000616010		F8W735	103 aa	Predicted RBP	18.25	■□□□□ 0.51
CCND3-223	ENST00000616010	BRI3	O95415	125 aa		18.25	■□□□□ 0.51
CCND3-223	ENST00000616010	IGHG4	P01861	327 aa		18.25	■□□□□ 0.51
CCND3-223	ENST00000616010	NPBWR1	P48145	328 aa		18.25	■□□□□ 0.51
CCND3-223	ENST00000616010	PSMB11	A5LHX3	300 aa		18.24	■□□□□ 0.51
CCND3-223	ENST00000616010	GNG7	O60262	68 aa		18.24	■□□□□ 0.51
CCND3-223	ENST00000616010	TSPAN15	O95858	294 aa		18.24	■□□□□ 0.51
CCND3-223	ENST00000616010	NMB	P08949	121 aa		18.24	■□□□□ 0.51
CCND3-223	ENST00000616010	RPL29	P47914	159 aa	Known RBP	18.24	■□□□□ 0.51
CCND3-223	ENST00000616010	SLC35B1	P78383	322 aa		18.24	■□□□□ 0.51
CCND3-223	ENST00000616010	TRGV9	Q99603	122 aa		18.24	■□□□□ 0.51
CCND3-223	ENST00000616010	TCF21	O43680	179 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	RAB5C	P51148	216 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	RAB2A	P61019	212 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	PRR20E	P86478	221 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	PRR20C	P86479	221 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	PRR20D	P86480	221 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	PRR20B	P86481	221 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	PRR20A	P86496	221 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	ATP5G2	Q06055	141 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	ZNF502	Q8TBZ5	544 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	EEF1AKMT3	Q96AZ1	226 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	PSMB8	P28062	276 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	TMEM41B	Q5BJD5	291 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	FAM213B	Q8TBF2	198 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	SLC39A9	Q9NUM3	307 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	NF1	P21359	2839 aa		18.23	■□□□□ 0.51
CCND3-223	ENST00000616010	OR2T8	A6NH00	312 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	RAB9A	P51151	201 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	TIGIT	Q495A1	244 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	GCSAML	Q5JQS6	135 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	CLLU1	Q5K131	121 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	LRRC20	Q8TCA0	184 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	CCDC140	Q96MF4	163 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	RPRM	Q9NS64	109 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	YIF1A	O95070	293 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	IGKV1-17	P01599	117 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	GPR183	P32249	361 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010		Q6ZRG5	221 aa		18.22	■□□□□ 0.51
CCND3-223	ENST00000616010	LINC00869	P0C866	280 aa		18.21	■□□□□ 0.51
CCND3-223	ENST00000616010	FCGR2B	P31994	310 aa	Predicted RBP	18.21	■□□□□ 0.51
CCND3-223	ENST00000616010	ZNF616	Q08AN1	781 aa		18.21	■□□□□ 0.51
CCND3-223	ENST00000616010	TEX38	Q6PEX7	206 aa		18.21	■□□□□ 0.51
CCND3-223	ENST00000616010	TXN2	Q99757	166 aa		18.21	■□□□□ 0.51
CCND3-223	ENST00000616010	TRBV7-1	A0A0A6YYK4	115 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	SELENOT	P62341	195 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	ACOT6	Q3I5F7	207 aa	Predicted RBP	18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	USMG5	Q96IX5	58 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	TRAV30	A0A087WSZ9	112 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	MB	P02144	154 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	M6PR	P20645	277 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	CLEC19A	Q6UXS0	136 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	OR10G4	Q8NGN3	311 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	OR10G9	Q8NGN4	311 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	OR10G7	Q8NGN6	311 aa		18.2	■□□□□ 0.5
CCND3-223	ENST00000616010	TMEM89	A2RUT3	159 aa		18.19	■□□□□ 0.5
CCND3-223	ENST00000616010	SRSF2	Q01130	221 aa	Known RBP	18.19	■□□□□ 0.5
CCND3-223	ENST00000616010	IGHV3-11	P01762	117 aa		18.18	■□□□□ 0.5
CCND3-223	ENST00000616010	PXDC1	Q5TGL8	231 aa		18.18	■□□□□ 0.5
CCND3-223	ENST00000616010	DPPA3	Q6W0C5	159 aa		18.18	■□□□□ 0.5
CCND3-223	ENST00000616010	RPP25L	Q8N5L8	163 aa	Known RBP	18.18	■□□□□ 0.5
CCND3-223	ENST00000616010	SAT2	Q96F10	170 aa	Predicted RBP	18.18	■□□□□ 0.5
CCND3-223	ENST00000616010	SCGB2A1	O75556	95 aa		18.18	■□□□□ 0.5
CCND3-223	ENST00000616010	CLEC3B	P05452	202 aa		18.18	■□□□□ 0.5
CCND3-223	ENST00000616010	PSG1	P11464	419 aa		18.18	■□□□□ 0.5
CCND3-223	ENST00000616010	FOXE3	Q13461	319 aa		18.18	■□□□□ 0.5
CCND3-223	ENST00000616010		A0A0G2JLM5	398 aa		18.17	■□□□□ 0.5
CCND3-223	ENST00000616010	RPLP1	P05386	114 aa	Known RBP	18.17	■□□□□ 0.5
CCND3-223	ENST00000616010	CTSG	P08311	255 aa		18.17	■□□□□ 0.5
CCND3-223	ENST00000616010	FAM122C	Q6P4D5	195 aa		18.17	■□□□□ 0.5
CCND3-223	ENST00000616010	KLHDC1	Q8N7A1	406 aa		18.17	■□□□□ 0.5
CCND3-223	ENST00000616010	RCC1L	Q96I51	464 aa	Known RBP	18.17	■□□□□ 0.5
CCND3-223	ENST00000616010	CHRDL1	Q9BU40	450 aa		18.17	■□□□□ 0.5
CCND3-223	ENST00000616010	SLC25A22	Q9H936	323 aa		18.17	■□□□□ 0.5
CCND3-223	ENST00000616010	GAR1	Q9NY12	217 aa	Known RBP	18.17	■□□□□ 0.5
CCND3-223	ENST00000616010	NUPL2	O15504	423 aa	Known RBP	18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	EIF3G	O75821	320 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	FABP1	P07148	127 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	ELANE	P08246	267 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	ADM	P35318	185 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	BLOC1S1	P78537	153 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	ZNF726P1	Q15940	193 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	SSX7	Q7RTT5	188 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	DOK5	Q9P104	306 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	MAST4	O15021	2626 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	RD3L	P0DJH9	198 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	C16orf95	Q9H693	158 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	GNB4	Q9HAV0	340 aa		18.16	■□□□□ 0.5
CCND3-223	ENST00000616010	TOMM40	O96008	361 aa		18.15	■□□□□ 0.5
CCND3-223	ENST00000616010	TGOLN2	O43493	480 aa		18.15	■□□□□ 0.5
CCND3-223	ENST00000616010	YPEL3	P61236	119 aa	Predicted RBP	18.15	■□□□□ 0.5
CCND3-223	ENST00000616010	LINC01006	Q8NI28	216 aa		18.15	■□□□□ 0.5
CCND3-223	ENST00000616010	HRH4	Q9H3N8	390 aa		18.15	■□□□□ 0.5
CCND3-223	ENST00000616010		A0A1B0GV50	99 aa		18.14	■□□□□ 0.49
CCND3-223	ENST00000616010	PPP5D1	E7EU14	171 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms