RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 DLL1O00548 723 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 NKX2-8O15522 239 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 REG1BP48304 166 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 FAM222BQ8WU58 562 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 NPIPB3Q92617 1050 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 ASCL3Q9NQ33 180 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 NDUFA4L2Q9NRX3 87 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 RPUSD1Q9UJJ7 312 aaKnown RBP12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 C10orf113Q5VZT2 155 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 TCF24Q7RTU0 167 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 OR2D3Q8NGH3 330 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 FXYD5Q96DB9 178 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 NCOR1P1Q9H4R4 102 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 RAB9BQ9NP90 201 aa12.23□□□□□ -0.45
PCDHGB1-202ENST00000611598 FSTL3O95633 263 aa12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 PLXNB1O43157 2135 aa12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 IGKV1D-37A0A075B6S9 117 aa12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 CDX4O14627 284 aaPredicted RBP12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 OR2J3O76001 311 aa12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 FOXA3P55318 350 aaPredicted RBP12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 WT1-ASQ06250 92 aa12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 LINC00322Q6ZN03 302 aaPredicted RBP12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 RNF7Q9UBF6 113 aa12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 RPH3ALQ9UNE2 315 aa12.22□□□□□ -0.45
PCDHGB1-202ENST00000611598 CGB1A6NKQ9 187 aa12.21□□□□□ -0.45
PCDHGB1-202ENST00000611598 FAM120AOSQ5T036 256 aa12.21□□□□□ -0.45
PCDHGB1-202ENST00000611598 RUSC1-AS1Q66K80 236 aa12.21□□□□□ -0.45
PCDHGB1-202ENST00000611598 LINC00173Q6ZV60 143 aa12.21□□□□□ -0.45
PCDHGB1-202ENST00000611598 SEM1Q6ZVN7 128 aa12.21□□□□□ -0.45
PCDHGB1-202ENST00000611598 BLNKQ8WV28 456 aa12.21□□□□□ -0.45
PCDHGB1-202ENST00000611598 CACNG8Q8WXS5 425 aa12.21□□□□□ -0.45
PCDHGB1-202ENST00000611598 A0A1B0GXF2 115 aa12.21□□□□□ -0.46
PCDHGB1-202ENST00000611598 IGLC7A0M8Q6 106 aa12.21□□□□□ -0.46
PCDHGB1-202ENST00000611598 TOMM40O96008 361 aa12.21□□□□□ -0.46
PCDHGB1-202ENST00000611598 ERASQ7Z444 233 aa12.21□□□□□ -0.46
PCDHGB1-202ENST00000611598 NKX6-3A6NJ46 265 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 ATP5IP56385 69 aaPredicted RBP12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 ERHP84090 104 aaKnown RBP12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 UBE2V1Q13404 147 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 LEMD1Q68G75 181 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 ZNF738Q8NE65 137 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 SARAFQ96BY9 339 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 ZNF430Q9H8G1 570 aaPredicted RBP12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 LAMA5O15230 3695 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 HIST1H1EP10412 219 aaKnown RBP12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 GLRXP35754 106 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 RBX1P62877 108 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 TNFAIP6P98066 277 aaPredicted RBP12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 DIAPH2-AS1Q14236 149 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 LINC00305Q7Z4B0 112 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 MUC15Q8N387 334 aa12.2□□□□□ -0.46
PCDHGB1-202ENST00000611598 TCRBV4S1A1TA0A5B7 111 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 IGHV1-46P01743 117 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 MYCNOSP40205 109 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 ZNF788Q6ZQV5 615 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 ZNF833PQ6ZTB9 187 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 ZNF596Q8TC21 504 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 LINC00574Q9H8X3 128 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 LOC105371242A0A075B767 164 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 IGHV1-69-2A0A0G2JMI3 117 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 MOSP00540 346 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 SLC25A5P05141 298 aaKnown RBP12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 CCL3L1P16619 93 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 GATA4P43694 442 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 OSR1Q8TAX0 266 aaPredicted RBP12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 TMEM70Q9BUB7 260 aa12.19□□□□□ -0.46
PCDHGB1-202ENST00000611598 IGLV3-9A0A075B6K5 115 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 OR4C46A6NHA9 309 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 H3BTX0 84 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 ZNF474Q6S9Z5 364 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 RPRMLQ8N4K4 120 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 GTSF1Q8WW33 167 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 EPDR1Q9UM22 224 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 hDV102S1A0JD36 115 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 PGPA6NDG6 321 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 APOA2P02652 100 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 ORM2P19652 201 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 CA7P43166 264 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 BPIFB3P59826 476 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 FAM169BQ8N8A8 192 aa12.18□□□□□ -0.46
PCDHGB1-202ENST00000611598 HBBP68871 147 aa12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 C22orf34Q6ZV56 151 aa12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 PDPNQ86YL7 162 aa12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 RBMXL3Q8N7X1 1067 aaKnown RBP12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 TPSG1Q9NRR2 321 aa12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 IGHV1-24A0A0C4DH33 117 aa12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 ZNF137PP52743 207 aa12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 FLYWCH2Q96CP2 140 aaKnown RBP12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 PGLYRP4Q96LB8 373 aa12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 MCRIP2Q9BUT9 160 aaKnown RBP12.17□□□□□ -0.46
PCDHGB1-202ENST00000611598 RP1L1Q8IWN7 2480 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB1-202ENST00000611598 C22orf46C9J442 243 aa12.16□□□□□ -0.46
PCDHGB1-202ENST00000611598 TM4SF5O14894 197 aa12.16□□□□□ -0.46
PCDHGB1-202ENST00000611598 FBLN7Q53RD9 439 aa12.16□□□□□ -0.46
PCDHGB1-202ENST00000611598 MPV17L2Q567V2 206 aa12.16□□□□□ -0.46
PCDHGB1-202ENST00000611598 OR5AN1Q8NGI8 311 aa12.16□□□□□ -0.46
PCDHGB1-202ENST00000611598 OR1B1Q8NGR6 318 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms