RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 C2orf50Q96LR7 162 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 SLC25A21Q9BQT8 299 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 OR2J1Q9GZK6 312 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 IMUPQ9GZP8 106 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 COMMD5Q9GZQ3 224 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 C11orf68Q9H3H3 251 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 CACYBPQ9HB71 228 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 SND1-IT1Q9HBX3 110 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 AK3Q9UIJ7 227 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 MRPS16Q9Y3D3 137 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 KDM5AP29375 1690 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 QRICH2Q9H0J4 1663 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 MAP3K1Q13233 1512 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 ANKRD36BQ8N2N9 1353 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 A2ML1A8K2U0 1454 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 ADGRL1O94910 1474 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 CEP170Q5SW79 1584 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 DENND4CQ5VZ89 1909 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 AKAP11Q9UKA4 1901 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 UBR2Q8IWV8 1755 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 TRAV41A0A0B4J266 112 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 A0A0D9SEW6 157 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 TLCD2A6NGC4 264 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 GGT3PA6NGU5 568 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 GGTLC3B5MD39 225 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 IGLL5B9A064 214 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 C9JQL5 133 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 GABARAPH6UMI1 98 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 NPFFO15130 113 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 GSTZ1O43708 216 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 TRGC2P03986 189 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 IGLV7-43P04211 117 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 ATP6V0CP27449 155 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 BRS3P32247 399 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 GNG4P50150 75 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 INSL3P51460 131 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 COPZ1P61923 177 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 RTL8BQ17RB0 113 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 MSRB3Q8IXL7 192 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 RPP25LQ8N5L8 163 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 LINC00304Q8N9R0 145 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 PLPP5Q8NEB5 264 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 C1orf64Q8NEQ6 169 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 OR4S1Q8NGB4 309 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 OR5A2Q8NGI9 324 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 FAM57AQ8TBR7 257 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 TWIST2Q8WVJ9 160 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 TOMM6Q96B49 74 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 ABHD14BQ96IU4 210 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 OR4C12Q96R67 309 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 ANAPC13Q9BS18 74 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 WDR61Q9GZS3 305 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 C16orf95Q9H693 158 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 TP73-AS1Q9UF72 201 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 PCTPQ9UKL6 214 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 ZNF706Q9Y5V0 76 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 BCORL1Q5H9F3 1711 aa2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 DICER1Q9UPY3 1922 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-213ENST00000609587 KDM6AO15550 1401 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 CPSF1Q10570 1443 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 TRAPPC8Q9Y2L5 1435 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 ANKRD26Q9UPS8 1709 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 IGHV1-45A0A0A0MS14 117 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 DPRXA6NFQ7 191 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 ZNF727A8MUV8 499 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 ZNF670-ZNF695F2Z2N8 137 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 M0R378 163 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 CDC42EP2O14613 210 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 IGKV1-5P01602 117 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 CRYGSP22914 178 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 CASP1P29466 404 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 TGFBR1P36897 503 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 ZNF80P51504 273 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 TMBIM6P55061 237 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 HOXC5Q00444 222 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 MEF2BQ02080 365 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 PDGFRLQ15198 375 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 ELOCQ15369 112 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 RRN3P1Q2M238 152 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 VMA21Q3ZAQ7 101 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 ZNF678Q5SXM1 525 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 TMEM244Q5VVB8 128 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 C1orf140Q5VVS0 124 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 GLT8D1Q68CQ7 371 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 FOXI2Q6ZQN5 318 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 TMEM136Q6ZRR5 245 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 LCA10Q71F78 164 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 PHF5AQ7RTV0 110 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 CROCCP2Q86T23 111 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 GPHB5Q86YW7 130 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 CTAGE3PQ8IX95 158 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 OR51A4Q8NGJ6 313 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 DCANP1Q8TF63 244 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 RNASE6Q93091 150 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 ZC2HC1AQ96GY0 325 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 MRPL57Q9BQC6 102 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 TUBA4BQ9H853 241 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 NAT8Q9UHE5 227 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 SCP2D1Q9UJQ7 156 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 BAIAP2Q9UQB8 552 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms