RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 FNDC4Q9H6D8 234 aaPredicted RBP8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 AUNIPQ9H7T9 357 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SEPSECSQ9HD40 501 aaKnown RBP8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 RRP15Q9Y3B9 282 aaKnown RBP8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 NACAE9PAV3 2078 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 CORTO00230 105 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 IGKV1-39P01597 117 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 IGKV1D-39P04432 117 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 RNASE2P10153 161 aaKnown RBP8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 BTF3P20290 206 aaKnown RBP8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 DLK1P80370 383 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 MLANAQ16655 118 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 RRN3P1Q2M238 152 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SFXN4Q6P4A7 337 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 DHRS11Q6UWP2 260 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SIGLEC15Q6ZMC9 328 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 C1orf158Q8N1D5 194 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 LYPD1Q8N2G4 141 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 OR4B1Q8NGF8 309 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SLC35B3Q9H1N7 401 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SAV1Q9H4B6 383 aaPredicted RBP8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 IFT46Q9NQC8 304 aa8.23□□□□□ -1.09
PDLIM1P1-201ENST00000604187 F5H768 121 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 PMP2P02689 132 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 DEFB130BP0DP73 79 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 DEFB130AP0DP74 79 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 CBX5P45973 191 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 HOXA1P49639 335 aaPredicted RBP8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 TBCEQ15813 527 aaPredicted RBP8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 USF2Q15853 346 aaPredicted RBP8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 TTC32Q5I0X7 151 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 FOXI2Q6ZQN5 318 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SSX7Q7RTT5 188 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 TBC1D26Q86UD7 250 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 OR5H6Q8NGV6 325 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 FRZBQ92765 325 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 LINC00052Q96N35 136 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 VCXQ9H320 206 aa8.22□□□□□ -1.09
PDLIM1P1-201ENST00000604187 TRAV30A0A087WSZ9 112 aa8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 INS-IGF2F8WCM5 200 aa8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 IGLC1P0CG04 106 aa8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 SUB1P53999 127 aaKnown RBP eCLIP8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 DHODHQ02127 395 aa8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 CLINT1Q14677 625 aa8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 OR5H2Q8NGV7 314 aa8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 Q8WTZ3 238 aa8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 TMEM208Q9BTX3 173 aa8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 Q9H8V8 135 aa8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 FAM212BQ9NTI7 297 aaPredicted RBP8.21□□□□□ -1.1
PDLIM1P1-201ENST00000604187 A0A0A6YYH2 397 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 A6NJ64 397 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 BUB3O43684 328 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 IL4P05112 153 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 S100GP29377 79 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 RPL5P46777 297 aaKnown RBP8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 RORCP51449 518 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 XGP55808 180 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 PSG9Q00887 426 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 OR1S2Q8NGQ3 325 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 OR6F1Q8NGZ6 308 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 COQ8AQ8NI60 647 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 RNF141Q8WVD5 230 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 CLUHP3Q96NS8 147 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 MAGT1Q9H0U3 335 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 Q9H3A6 140 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 SCPEP1Q9HB40 452 aa8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 TXNL4BQ9NX01 149 aaKnown RBP8.2□□□□□ -1.1
PDLIM1P1-201ENST00000604187 A0A0B4J293 547 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 LYRM9A8MSI8 78 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 F6UB75 175 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 M0QYG6 137 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 GSTZ1O43708 216 aaPredicted RBP8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 IGKV1-5P01602 117 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 OR10J1P30954 320 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 ETV6P41212 452 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 RND2P52198 227 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 TAS2R46P59540 309 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 YPEL3P61236 119 aaPredicted RBP8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 ZNF79Q15937 498 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 PDCD10Q9BUL8 212 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 WDR12Q9GZL7 423 aaKnown RBP8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 ENY2Q9NPA8 101 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 DIABLOQ9NR28 239 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 PTTG2Q9NZH5 202 aa8.19□□□□□ -1.1
PDLIM1P1-201ENST00000604187 ZNF705GA8MUZ8 300 aaPredicted RBP8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 PRM2P04554 102 aa8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 CLEC2LP0C7M8 214 aa8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 MXD1Q05195 221 aa8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 FAM78BQ5VT40 261 aa8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 EBLN2Q6P2I7 272 aa8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 PRSS54Q6PEW0 395 aa8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 OR4C16Q8NGL9 310 aa8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 MDFICQ9P1T7 246 aa8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 ANAPC10Q9UM13 185 aa8.18□□□□□ -1.1
PDLIM1P1-201ENST00000604187 ATP5G1P05496 136 aa8.17□□□□□ -1.1
PDLIM1P1-201ENST00000604187 SDC2P34741 201 aa8.17□□□□□ -1.1
PDLIM1P1-201ENST00000604187 HRH1P35367 487 aa8.17□□□□□ -1.1
PDLIM1P1-201ENST00000604187 ID1P41134 155 aa8.17□□□□□ -1.1
PDLIM1P1-201ENST00000604187 ATP5G3P48201 142 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms