RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 PDPNQ86YL7 162 aa15.09■□□□□ 0.01
ARHGEF1-221ENST00000600387 DEFB125Q8N687 156 aa15.09■□□□□ 0.01
ARHGEF1-221ENST00000600387 STXBP6Q8NFX7 210 aa15.09■□□□□ 0.01
ARHGEF1-221ENST00000600387 GPR82Q96P67 336 aa15.09■□□□□ 0.01
ARHGEF1-221ENST00000600387 RAI1Q7Z5J4 1906 aaPredicted RBP15.08■□□□□ 0
ARHGEF1-221ENST00000600387 RNF151Q2KHN1 245 aa15.08■□□□□ 0
ARHGEF1-221ENST00000600387 SPRNQ5BIV9 151 aa15.08■□□□□ 0
ARHGEF1-221ENST00000600387 TCF24Q7RTU0 167 aa15.08■□□□□ 0
ARHGEF1-221ENST00000600387 FAM169BQ8N8A8 192 aa15.08■□□□□ 0
ARHGEF1-221ENST00000600387 SH2D7A6NKC9 451 aaPredicted RBP15.08■□□□□ 0
ARHGEF1-221ENST00000600387 TM4SF5O14894 197 aa15.08■□□□□ 0
ARHGEF1-221ENST00000600387 FSTL3O95633 263 aa15.08■□□□□ 0
ARHGEF1-221ENST00000600387 SLC25A5P05141 298 aaKnown RBP15.08■□□□□ 0
ARHGEF1-221ENST00000600387 GNG5P63218 68 aa15.08■□□□□ 0
ARHGEF1-221ENST00000600387 SSBP2P81877 361 aaPredicted RBP15.08■□□□□ 0
ARHGEF1-221ENST00000600387 MSMPQ1L6U9 139 aa15.08■□□□□ 0
ARHGEF1-221ENST00000600387 PRSS22Q9GZN4 317 aa15.08■□□□□ 0
ARHGEF1-221ENST00000600387 RPUSD1Q9UJJ7 312 aaKnown RBP15.08■□□□□ 0
ARHGEF1-221ENST00000600387 DYSFO75923 2080 aa15.07■□□□□ 0
ARHGEF1-221ENST00000600387 hDV102S1A0JD36 115 aa15.07■□□□□ 0
ARHGEF1-221ENST00000600387 TOX4O94842 621 aa15.07■□□□□ 0
ARHGEF1-221ENST00000600387 HLA-DRB1P01911 266 aa15.07■□□□□ 0
ARHGEF1-221ENST00000600387 C9orf106Q8NAJ2 232 aa15.07■□□□□ 0
ARHGEF1-221ENST00000600387 MLST8Q9BVC4 326 aa15.07■□□□□ 0
ARHGEF1-221ENST00000600387 GFRA4Q9GZZ7 299 aa15.07■□□□□ 0
ARHGEF1-221ENST00000600387 PLSCR4Q9NRQ2 329 aa15.07■□□□□ 0
ARHGEF1-221ENST00000600387 APOA2P02652 100 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 LIPFP07098 398 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 ZNF883P0CG24 379 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 SUB1P53999 127 aaKnown RBP eCLIP15.06■□□□□ 0
ARHGEF1-221ENST00000600387 FOXA3P55318 350 aaPredicted RBP15.06■□□□□ 0
ARHGEF1-221ENST00000600387 PET117Q6UWS5 81 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 RBMXL3Q8N7X1 1067 aaKnown RBP15.06■□□□□ 0
ARHGEF1-221ENST00000600387 THAP8Q8NA92 274 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 ITLN1Q8WWA0 313 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 HARBI1Q96MB7 349 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 MS4A6AQ9H2W1 248 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 ZNF492Q9P255 531 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 LINC00305Q7Z4B0 112 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 NPIPB3Q92617 1050 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 NDFIP1Q9BT67 221 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 MAP1LC3CQ9BXW4 147 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 SCRT2Q9NQ03 307 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 CACNA1GO43497 2377 aa15.06■□□□□ 0
ARHGEF1-221ENST00000600387 P01737 135 aa15.05■□□□□ 0
ARHGEF1-221ENST00000600387 FAM201AQ5SY85 155 aa15.05■□□□□ 0
ARHGEF1-221ENST00000600387 ZNF833PQ6ZTB9 187 aa15.05■□□□□ 0
ARHGEF1-221ENST00000600387 BHLHA15Q7RTS1 189 aaPredicted RBP15.05■□□□□ 0
ARHGEF1-221ENST00000600387 FMC1Q96HJ9 113 aa15.05■□□□□ 0
ARHGEF1-221ENST00000600387 CST9LQ9H4G1 147 aa15.05■□□□□ 0
ARHGEF1-221ENST00000600387 URB1O60287 2271 aaKnown RBP15.05■□□□□ -0
ARHGEF1-221ENST00000600387 IGKV1D-37A0A075B6S9 117 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 PGPA6NDG6 321 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 SPRY3O43610 288 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 MOSP00540 346 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 GATA4P43694 442 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 DUX4L9Q6RFH8 374 aaPredicted RBP15.05■□□□□ -0
ARHGEF1-221ENST00000600387 RBPMS2Q6ZRY4 209 aaKnown RBP15.05■□□□□ -0
ARHGEF1-221ENST00000600387 LINC00173Q6ZV60 143 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 RND1Q92730 232 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 PERPQ96FX8 193 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 FNDC4Q9H6D8 234 aaPredicted RBP15.05■□□□□ -0
ARHGEF1-221ENST00000600387 ZNF71Q9NQZ8 489 aaPredicted RBP15.05■□□□□ -0
ARHGEF1-221ENST00000600387 RNF7Q9UBF6 113 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 DKK4Q9UBT3 224 aa15.05■□□□□ -0
ARHGEF1-221ENST00000600387 M0QZ24 198 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 OR4A5Q8NH83 315 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 GTSF1Q8WW33 167 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 GAFA1Q96PS6 74 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 TP73-AS1Q9UF72 201 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 INTS1Q8N201 2190 aaKnown RBP15.04■□□□□ -0
ARHGEF1-221ENST00000600387 MUC21A0A0G2JKD1 596 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 MUC21A0A140T8X8 626 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 C19orf71A6NCJ1 209 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 FAM231BA6NCW3 169 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 PRR33A8MZF0 331 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 CD5LO43866 347 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 MUC21Q5SSG8 566 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 SMIM15Q7Z3B0 74 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 PGLYRP4Q96LB8 373 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 SLC25A15Q9Y619 301 aa15.04■□□□□ -0
ARHGEF1-221ENST00000600387 LOC102724200A0A096LPH7 203 aaPredicted RBP15.03■□□□□ -0
ARHGEF1-221ENST00000600387 OR2T8A6NH00 312 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 LTAP01374 205 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 HIST1H1AQ02539 215 aaPredicted RBP15.03■□□□□ -0
ARHGEF1-221ENST00000600387 TMEM177Q53S58 311 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 OCIAD2Q56VL3 154 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 LDLRAD2Q5SZI1 272 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 DAZAP1Q96EP5 407 aaKnown RBP15.03■□□□□ -0
ARHGEF1-221ENST00000600387 HSPB8Q9UJY1 196 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 SP9P0CG40 484 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 LINC00322Q6ZN03 302 aaPredicted RBP15.03■□□□□ -0
ARHGEF1-221ENST00000600387 VSTM2AQ8TAG5 236 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 TMEM167AQ8TBQ9 72 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 BLNKQ8WV28 456 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 MRPL20Q9BYC9 149 aaKnown RBP15.03■□□□□ -0
ARHGEF1-221ENST00000600387 PROCRQ9UNN8 238 aa15.03■□□□□ -0
ARHGEF1-221ENST00000600387 CHEK1O14757 476 aa15.02□□□□□ -0.01
ARHGEF1-221ENST00000600387 PSG1P11464 419 aa15.02□□□□□ -0.01
ARHGEF1-221ENST00000600387 WT1-ASQ06250 92 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms