RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 RND2P52198 227 aa13.2□□□□□ -0.3
USHBP1-209ENST00000598570 PAX9P55771 341 aa13.2□□□□□ -0.3
USHBP1-209ENST00000598570 IL15RAQ13261 267 aa13.2□□□□□ -0.3
USHBP1-209ENST00000598570 GAMTQ14353 236 aa13.2□□□□□ -0.3
USHBP1-209ENST00000598570 GTSCR1Q86UQ5 136 aa13.2□□□□□ -0.3
USHBP1-209ENST00000598570 SMIM8Q96KF7 97 aa13.2□□□□□ -0.3
USHBP1-209ENST00000598570 SPAG8Q99932 426 aaPredicted RBP13.2□□□□□ -0.3
USHBP1-209ENST00000598570 PUS1Q9Y606 427 aaKnown RBP eCLIP13.2□□□□□ -0.3
USHBP1-209ENST00000598570 TRAV6A0A075B6T7 132 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 CD5P06127 495 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 TAS2R30P59541 319 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 SLC16A13Q7RTY0 426 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 SBSPONQ8IVN8 264 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 NPIPB3Q92617 1050 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 NEURL2Q9BR09 285 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 GINS3Q9BRX5 216 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 C20orf24Q9BUV8 137 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 RHPN1-AS1Q9BWJ2 59 aa13.19□□□□□ -0.3
USHBP1-209ENST00000598570 IGKV1D-37A0A075B6S9 117 aa13.18□□□□□ -0.3
USHBP1-209ENST00000598570 PMS2P5A8MQ11 134 aa13.18□□□□□ -0.3
USHBP1-209ENST00000598570 CD7P09564 240 aa13.18□□□□□ -0.3
USHBP1-209ENST00000598570 OR10J1P30954 320 aa13.18□□□□□ -0.3
USHBP1-209ENST00000598570 NKX2-1P43699 371 aaPredicted RBP13.18□□□□□ -0.3
USHBP1-209ENST00000598570 RPP30P78346 268 aaKnown RBP13.18□□□□□ -0.3
USHBP1-209ENST00000598570 TIGITQ495A1 244 aa13.18□□□□□ -0.3
USHBP1-209ENST00000598570 LILRB2Q8N423 598 aa13.18□□□□□ -0.3
USHBP1-209ENST00000598570 ZBTB8BQ8NAP8 495 aaPredicted RBP13.18□□□□□ -0.3
USHBP1-209ENST00000598570 MARVELD1Q9BSK0 173 aa13.18□□□□□ -0.3
USHBP1-209ENST00000598570 MAGT1Q9H0U3 335 aa13.18□□□□□ -0.3
USHBP1-209ENST00000598570 IGHV3OR16-8A0A075B7F1 116 aa13.17□□□□□ -0.3
USHBP1-209ENST00000598570 ZNF207O43670 478 aaKnown RBP13.17□□□□□ -0.3
USHBP1-209ENST00000598570 SCGB2A1O75556 95 aa13.17□□□□□ -0.3
USHBP1-209ENST00000598570 RAB11AP62491 216 aa13.17□□□□□ -0.3
USHBP1-209ENST00000598570 LAMTOR1Q6IAA8 161 aa13.17□□□□□ -0.3
USHBP1-209ENST00000598570 THAP8Q8NA92 274 aa13.17□□□□□ -0.3
USHBP1-209ENST00000598570 RNF2Q99496 336 aa13.17□□□□□ -0.3
USHBP1-209ENST00000598570 SEC22CQ9BRL7 303 aa13.17□□□□□ -0.3
USHBP1-209ENST00000598570 TM2D3Q9BRN9 247 aa13.17□□□□□ -0.3
USHBP1-209ENST00000598570 C11orf1Q9H5F2 150 aa13.17□□□□□ -0.3
USHBP1-209ENST00000598570 TRAV2A0A0B4J234 112 aa13.16□□□□□ -0.3
USHBP1-209ENST00000598570 YIF1AO95070 293 aa13.16□□□□□ -0.3
USHBP1-209ENST00000598570 TOMM40O96008 361 aa13.16□□□□□ -0.3
USHBP1-209ENST00000598570 APOHP02749 345 aaPredicted RBP13.16□□□□□ -0.3
USHBP1-209ENST00000598570 IFNA4P05014 189 aa13.16□□□□□ -0.3
USHBP1-209ENST00000598570 IAPPP10997 89 aa13.16□□□□□ -0.3
USHBP1-209ENST00000598570 CD81P60033 236 aa13.16□□□□□ -0.3
USHBP1-209ENST00000598570 POLR2GP62487 172 aaKnown RBP eCLIP13.16□□□□□ -0.3
USHBP1-209ENST00000598570 IAH1Q2TAA2 248 aaPredicted RBP13.16□□□□□ -0.3
USHBP1-209ENST00000598570 TMEM14EPQ6UXP3 125 aa13.16□□□□□ -0.3
USHBP1-209ENST00000598570 RBPMS2Q6ZRY4 209 aaKnown RBP13.16□□□□□ -0.3
USHBP1-209ENST00000598570 NRARPQ7Z6K4 114 aa13.16□□□□□ -0.3
USHBP1-209ENST00000598570 C12orf45Q8N5I9 185 aaPredicted RBP13.16□□□□□ -0.3
USHBP1-209ENST00000598570 RAB40CQ96S21 281 aa13.16□□□□□ -0.3
USHBP1-209ENST00000598570 IGKV1OR2-108A0A075B7D4 117 aa13.15□□□□□ -0.3
USHBP1-209ENST00000598570 SNRPGP15A8MWD9 76 aa13.15□□□□□ -0.3
USHBP1-209ENST00000598570 WRBO00258 174 aa13.15□□□□□ -0.3
USHBP1-209ENST00000598570 MBPP02686 304 aaPredicted RBP13.15□□□□□ -0.3
USHBP1-209ENST00000598570 NPPCP23582 126 aa13.15□□□□□ -0.3
USHBP1-209ENST00000598570 GUCA2BQ16661 112 aa13.15□□□□□ -0.3
USHBP1-209ENST00000598570 Q8WTZ3 238 aa13.15□□□□□ -0.3
USHBP1-209ENST00000598570 TRGV9Q99603 122 aa13.15□□□□□ -0.3
USHBP1-209ENST00000598570 RCL1Q9Y2P8 373 aaKnown RBP13.15□□□□□ -0.3
USHBP1-209ENST00000598570 RBMY1BA6NDE4 496 aaKnown RBP13.14□□□□□ -0.31
USHBP1-209ENST00000598570 RBMY1EA6NEQ0 496 aaKnown RBP13.14□□□□□ -0.31
USHBP1-209ENST00000598570 OR11H12B2RN74 326 aa13.14□□□□□ -0.31
USHBP1-209ENST00000598570 FNDC10F2Z333 226 aa13.14□□□□□ -0.31
USHBP1-209ENST00000598570 TSC22D2O75157 780 aa13.14□□□□□ -0.31
USHBP1-209ENST00000598570 RBMY1DP0C7P1 496 aaKnown RBP13.14□□□□□ -0.31
USHBP1-209ENST00000598570 RD3LP0DJH9 198 aa13.14□□□□□ -0.31
USHBP1-209ENST00000598570 BMI1P35226 326 aa13.14□□□□□ -0.31
USHBP1-209ENST00000598570 ST8SIA2Q92186 375 aa13.14□□□□□ -0.31
USHBP1-209ENST00000598570 STRAPQ9Y3F4 350 aaKnown RBP13.14□□□□□ -0.31
USHBP1-209ENST00000598570 HUWE1Q7Z6Z7 4374 aaKnown RBP13.13□□□□□ -0.31
USHBP1-209ENST00000598570 PRAF2O60831 178 aa13.13□□□□□ -0.31
USHBP1-209ENST00000598570 PSG1P11464 419 aa13.13□□□□□ -0.31
USHBP1-209ENST00000598570 HAGHQ16775 308 aa13.13□□□□□ -0.31
USHBP1-209ENST00000598570 ACY3Q96HD9 319 aa13.13□□□□□ -0.31
USHBP1-209ENST00000598570 C2orf50Q96LR7 162 aa13.13□□□□□ -0.31
USHBP1-209ENST00000598570 METTL26Q96S19 204 aa13.13□□□□□ -0.31
USHBP1-209ENST00000598570 SELENOKQ9Y6D0 94 aa13.13□□□□□ -0.31
USHBP1-209ENST00000598570 A0A1W2PS18 150 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 C7orf66A4D0T2 115 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 CMC4P56277 68 aaPredicted RBP13.12□□□□□ -0.31
USHBP1-209ENST00000598570 USF2Q15853 346 aaPredicted RBP13.12□□□□□ -0.31
USHBP1-209ENST00000598570 ODF3L2Q3SX64 289 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 SPANXN5Q5MJ07 72 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 DEFB125Q8N687 156 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 ENKURQ8TC29 256 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 SLC35E1Q96K37 410 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 CITED4Q96RK1 184 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 ASCL2Q99929 193 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 PSENENQ9NZ42 101 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 U3KQK5 164 aa13.12□□□□□ -0.31
USHBP1-209ENST00000598570 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
USHBP1-209ENST00000598570 BUB3O43684 328 aa13.11□□□□□ -0.31
USHBP1-209ENST00000598570 OR8G2PQ6IF36 304 aa13.11□□□□□ -0.31
USHBP1-209ENST00000598570 C16orf54Q6UWD8 224 aa13.11□□□□□ -0.31
USHBP1-209ENST00000598570 TMEM144Q7Z5S9 345 aa13.11□□□□□ -0.31
USHBP1-209ENST00000598570 OR51G1Q8NGK1 321 aa13.11□□□□□ -0.31
USHBP1-209ENST00000598570 TMEM231Q9H6L2 316 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms