RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 OR52B4Q8NGK2 314 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 RCHY1Q96PM5 261 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 CITED4Q96RK1 184 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 SPAG8Q99932 426 aaPredicted RBP8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 SRD5A3Q9H8P0 318 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 PTTG2Q9NZH5 202 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 TBC1D24Q9ULP9 559 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 TRAV14DV4A0A0A6YYC5 116 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 TCRBP04435 133 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 ODF3L2Q3SX64 289 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 C4orf46Q504U0 113 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 FAM90A2PQ658T7 463 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 SLC16A13Q7RTY0 426 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 ST8SIA2Q92186 375 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 NPIPB3Q92617 1050 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 WWC2-AS2Q96NR7 200 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 GINS3Q9BRX5 216 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 MAGT1Q9H0U3 335 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 VSIRQ9H7M9 311 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 TUBA4BQ9H853 241 aa8.19□□□□□ -1.1
SHKBP1-206ENST00000595523 TRAV30A0A087WSZ9 112 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 PRSS46E5RG02 174 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 SYNGR2O43760 224 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 OR10J1P30954 320 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 ID3Q02535 119 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 ETFRF1Q6IPR1 90 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 NOXA1Q86UR1 476 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 OR4D5Q8NGN0 318 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 OR1S2Q8NGQ3 325 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 MITD1Q8WV92 249 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 S100ZQ8WXG8 99 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 ACY3Q96HD9 319 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 NUDT15Q9NV35 164 aa8.18□□□□□ -1.1
SHKBP1-206ENST00000595523 IGKV1D-37A0A075B6S9 117 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 TRAV6A0A075B6T7 132 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 IGHV3-66A0A0C4DH42 116 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 WRBO00258 174 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 MED6O75586 246 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 IFNA4P05014 189 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 CRYBB3P26998 211 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 ATP5IP56385 69 aaPredicted RBP8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 YPEL3P61236 119 aaPredicted RBP8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 IFITM3Q01628 133 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 ASAH1Q13510 395 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 GAMTQ14353 236 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 LAMTOR1Q6IAA8 161 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 COQ8AQ8NI60 647 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 RETNQ9HD89 108 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 UBQLN2Q9UHD9 624 aa8.17□□□□□ -1.1
SHKBP1-206ENST00000595523 IGKV3-7A0A075B6H7 116 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 OR4C46A6NHA9 309 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 H3BP45 60 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 UPK1BO75841 260 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 DFFBO76075 338 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 GPX4P36969 197 aaPredicted RBP8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 POLR2GP62487 172 aaKnown RBP eCLIP8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 USF2Q15853 346 aaPredicted RBP8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 TCF24Q7RTU0 167 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 CIB3Q96Q77 187 aaPredicted RBP8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 SPATA25Q9BR10 227 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 SEC22CQ9BRL7 303 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 ZMAT4Q9H898 229 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 U3KQE9 123 aa8.16□□□□□ -1.1
SHKBP1-206ENST00000595523 IGKV1OR2-108A0A075B7D4 117 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 CCSO14618 274 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 SCGB2A1O75556 95 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 TOMM40O96008 361 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 IFNA21P01568 189 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 PSG1P11464 419 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 NPPCP23582 126 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 TFPI2P48307 235 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 ZNF90Q03938 601 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 ZNF846Q147U1 533 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 ZNF124Q15973 351 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 GBGT1Q8N5D6 347 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 Q8WTZ3 238 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 METTL26Q96S19 204 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 FAM110AQ9BQ89 295 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 WDR12Q9GZL7 423 aaKnown RBP8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 BATF3Q9NR55 127 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 RCL1Q9Y2P8 373 aaKnown RBP8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 RYR3Q15413 4870 aa8.15□□□□□ -1.1
SHKBP1-206ENST00000595523 FAM240BA0A1B0GVZ2 78 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 PMS2P5A8MQ11 134 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 IL4P05112 153 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 H2AFB2P0C5Z0 115 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 RD3LP0DJH9 198 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 NKX2-1P43699 371 aaPredicted RBP8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 P2RY1P47900 373 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 PAX9P55771 341 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 RAB11AP62491 216 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 IAH1Q2TAA2 248 aaPredicted RBP8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 SPANXN5Q5MJ07 72 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 FAM24BQ8N5W8 94 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 THAP8Q8NA92 274 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 ZBTB8BQ8NAP8 495 aaPredicted RBP8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 ZNF431Q8TF32 576 aaPredicted RBP8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 SLC35E1Q96K37 410 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 MS4A6AQ9H2W1 248 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 MAP6D1Q9H9H5 199 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms