RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 F2RP25116 425 aa15.44■□□□□ 0.06
LSM4-203ENST00000593829 SERF2P84101 59 aa15.44■□□□□ 0.06
LSM4-203ENST00000593829 CDPF1Q6NVV7 123 aa15.44■□□□□ 0.06
LSM4-203ENST00000593829 OSR1Q8TAX0 266 aaPredicted RBP15.44■□□□□ 0.06
LSM4-203ENST00000593829 LINC00527Q9UJ94 153 aa15.44■□□□□ 0.06
LSM4-203ENST00000593829 SLC25A17O43808 307 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 IGLV2-23P01705 113 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 CD28P10747 220 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 SGMS2Q8NHU3 365 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 RNASEH2CQ8TDP1 164 aaKnown RBP15.43■□□□□ 0.06
LSM4-203ENST00000593829 LSM10Q969L4 123 aaKnown RBP15.43■□□□□ 0.06
LSM4-203ENST00000593829 GNG13Q9P2W3 67 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 IGHV7-81A0A0B4J1V7 117 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 PSMB11A5LHX3 300 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 KIR2DS2P43631 304 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 CATR1Q13166 79 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 OR4S2Q8NH73 311 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 PYGO2Q9BRQ0 406 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 VAX2Q9UIW0 290 aa15.43■□□□□ 0.06
LSM4-203ENST00000593829 SRRM4A7MD48 611 aaKnown RBP15.42■□□□□ 0.06
LSM4-203ENST00000593829 FCN1O00602 326 aa15.42■□□□□ 0.06
LSM4-203ENST00000593829 RAB11AP62491 216 aa15.42■□□□□ 0.06
LSM4-203ENST00000593829 SLC35B1P78383 322 aa15.42■□□□□ 0.06
LSM4-203ENST00000593829 LBHQ53QV2 105 aaPredicted RBP15.42■□□□□ 0.06
LSM4-203ENST00000593829 GFI1BQ5VTD9 330 aa15.42■□□□□ 0.06
LSM4-203ENST00000593829 SCGB1C1Q8TD33 95 aa15.42■□□□□ 0.06
LSM4-203ENST00000593829 PINX1Q96BK5 328 aaKnown RBP15.42■□□□□ 0.06
LSM4-203ENST00000593829 GPR146Q96CH1 333 aa15.42■□□□□ 0.06
LSM4-203ENST00000593829 RPRMQ9NS64 109 aa15.42■□□□□ 0.06
LSM4-203ENST00000593829 TSTD3H0UI37 97 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 IFNA1P01562 189 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 IGF1P05019 195 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 RD3LP0DJH9 198 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 VMA21Q3ZAQ7 101 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 COA6Q5JTJ3 125 aaKnown RBP15.41■□□□□ 0.06
LSM4-203ENST00000593829 ZNF329Q86UD4 541 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 OR4X2Q8NGF9 303 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 SRD5A3Q9H8P0 318 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 ZNF580Q9UK33 172 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 DDTP30046 118 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 BRWD1-AS2P59051 145 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 CX3CL1P78423 397 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 C10orf99Q6UWK7 81 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 PPP1R27Q86WC6 154 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 TPSG1Q9NRR2 321 aa15.41■□□□□ 0.06
LSM4-203ENST00000593829 M0QZ24 198 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 CRYGBP07316 175 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 GAMTQ14353 236 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 HIST2H2BDQ6DRA6 164 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 SLC25A24Q6NUK1 477 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 ZNF562Q6V9R5 426 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 TMEM183AQ8IXX5 376 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 TEX45Q8NA69 505 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 OR51H1Q8NH63 302 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 PACRGQ96M98 296 aaPredicted RBP15.4■□□□□ 0.06
LSM4-203ENST00000593829 HIST1H2BLQ99880 126 aa15.4■□□□□ 0.06
LSM4-203ENST00000593829 A0A0G2JRQ6 117 aa15.39■□□□□ 0.05
LSM4-203ENST00000593829 ATP6V0E1O15342 81 aa15.39■□□□□ 0.05
LSM4-203ENST00000593829 RBFOX2O43251 390 aaKnown RBP eCLIP15.39■□□□□ 0.05
LSM4-203ENST00000593829 FABP4P15090 132 aa15.39■□□□□ 0.05
LSM4-203ENST00000593829 JOSD1Q15040 202 aaPredicted RBP15.39■□□□□ 0.05
LSM4-203ENST00000593829 ZNF726P1Q15940 193 aa15.39■□□□□ 0.05
LSM4-203ENST00000593829 CITED2Q99967 270 aaPredicted RBP15.39■□□□□ 0.05
LSM4-203ENST00000593829 SMCO3A2RU48 225 aa15.39■□□□□ 0.05
LSM4-203ENST00000593829 CA2P00918 260 aa15.39■□□□□ 0.05
LSM4-203ENST00000593829 TMEM41BQ5BJD5 291 aa15.39■□□□□ 0.05
LSM4-203ENST00000593829 TIMM9Q9Y5J7 89 aa15.39■□□□□ 0.05
LSM4-203ENST00000593829 SYNGR2O43760 224 aa15.38■□□□□ 0.05
LSM4-203ENST00000593829 RAMP3O60896 148 aa15.38■□□□□ 0.05
LSM4-203ENST00000593829 HBG1P69891 147 aa15.38■□□□□ 0.05
LSM4-203ENST00000593829 HBG2P69892 147 aa15.38■□□□□ 0.05
LSM4-203ENST00000593829 NDPQ00604 133 aa15.38■□□□□ 0.05
LSM4-203ENST00000593829 TCTEX1D4Q5JR98 221 aa15.38■□□□□ 0.05
LSM4-203ENST00000593829 CYP2G1PQ6ZSU1 146 aa15.38■□□□□ 0.05
LSM4-203ENST00000593829 NAT8Q9UHE5 227 aa15.38■□□□□ 0.05
LSM4-203ENST00000593829 TCRBV4S1A1TA0A5B7 111 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 HRASP01112 189 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 SERPINE2P07093 398 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 PFN1P07737 140 aaKnown RBP15.37■□□□□ 0.05
LSM4-203ENST00000593829 SAA1P0DJI8 122 aaPredicted RBP15.37■□□□□ 0.05
LSM4-203ENST00000593829 TEX38Q6PEX7 206 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 SSX9Q7RTT3 188 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 NDUFA11Q86Y39 141 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 ACTR3CQ9C0K3 210 aaPredicted RBP15.37■□□□□ 0.05
LSM4-203ENST00000593829 ZFP92A6NM28 416 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 HPRT1P00492 218 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 TMEM267Q0VDI3 215 aaPredicted RBP15.37■□□□□ 0.05
LSM4-203ENST00000593829 FXYD3Q14802 87 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 RSG1Q9BU20 258 aa15.37■□□□□ 0.05
LSM4-203ENST00000593829 TET2Q6N021 2002 aaPredicted RBP15.36■□□□□ 0.05
LSM4-203ENST00000593829 TRAV41A0A0B4J266 112 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 FAM90A26D6RGX4 464 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 CNIH1O95406 144 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 LY86O95711 162 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 FGF7P21781 194 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 GNB1P62873 340 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 CFHR3Q02985 330 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 NSUN5P1Q3KNT7 163 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 PRR31Q5SQ13 230 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 VKORC1L1Q8N0U8 176 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms