RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CLN5O75503 358 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 OR2J3O76001 311 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 NDUFB8O95169 186 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 TSPAN15O95858 294 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 IGHV3-48P01763 117 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 PPIFP30405 207 aaKnown RBP10.51□□□□□ -0.73
VMP1-217ENST00000593168 FCGR2BP31994 310 aaPredicted RBP10.51□□□□□ -0.73
VMP1-217ENST00000593168 SELENOTP62341 195 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 PRR20EP86478 221 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 PRR20CP86479 221 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 PRR20DP86480 221 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 PRR20BP86481 221 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 PRR20AP86496 221 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
VMP1-217ENST00000593168 TMEM41BQ5BJD5 291 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 FFAR4Q5NUL3 377 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 ACSM6Q6P461 480 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 NECAP1Q8NC96 275 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 ESM1Q9NQ30 184 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 FBXL7Q9UJT9 491 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 PXMP4Q9Y6I8 212 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 TRAV30A0A087WSZ9 112 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 IGHV3-21A0A0B4J1V1 117 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 TCRBV4S1A1TA0A5B7 111 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 DNAJC9-AS1A6NH13 148 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 ZFP92A6NM28 416 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 LINC00869P0C866 280 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 M6PRP20645 277 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 NPBWR1P48145 328 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 FHITP49789 147 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 MFAP4P55083 255 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 B2MP61769 119 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 CFHR3Q02985 330 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 PXDC1Q5TGL8 231 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 MIC13Q5XKP0 118 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 Q6ZRG5 221 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 CYP2G1PQ6ZSU1 146 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 Q8N2B8 174 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 STPG3Q8N7X2 389 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 CXorf58Q96LI9 332 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 TXN2Q99757 166 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 VSIRQ9H7M9 311 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 ZNF702PQ9H963 129 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 ZNF355PQ9NSJ1 428 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 SLC39A9Q9NUM3 307 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 C21orf62Q9NYP8 219 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 LINC00527Q9UJ94 153 aa10.5□□□□□ -0.73
VMP1-217ENST00000593168 YIF1AO95070 293 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 IGLC1P0CG04 106 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 ELLP55199 621 aaPredicted RBP10.49□□□□□ -0.73
VMP1-217ENST00000593168 RPL15P61313 204 aaKnown RBP10.49□□□□□ -0.73
VMP1-217ENST00000593168 RHOGP84095 191 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 DEFA6Q01524 100 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 BPIFCQ8NFQ6 507 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 OR10G4Q8NGN3 311 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 OR10G9Q8NGN4 311 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 OR10G7Q8NGN6 311 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 LYPD6BQ8NI32 183 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 FAM213BQ8TBF2 198 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 NOL4LQ96MY1 436 aaPredicted RBP10.49□□□□□ -0.73
VMP1-217ENST00000593168 DUX5Q96PT3 197 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 ZNF747Q9BV97 191 aa10.49□□□□□ -0.73
VMP1-217ENST00000593168 PRKDCP78527 4128 aaKnown RBP10.48□□□□□ -0.73
VMP1-217ENST00000593168 FAM223BA6NKX1 122 aa10.48□□□□□ -0.73
VMP1-217ENST00000593168 IGLV1-40P01703 118 aa10.48□□□□□ -0.73
VMP1-217ENST00000593168 FABP1P07148 127 aa10.48□□□□□ -0.73
VMP1-217ENST00000593168 H2AFB1P0C5Y9 115 aa10.48□□□□□ -0.73
VMP1-217ENST00000593168 RAB2AP61019 212 aa10.48□□□□□ -0.73
VMP1-217ENST00000593168 C15orf32Q32M92 178 aa10.48□□□□□ -0.73
VMP1-217ENST00000593168 FAM223AQ8IWN6 122 aa10.48□□□□□ -0.73
VMP1-217ENST00000593168 RPP25LQ8N5L8 163 aaKnown RBP10.48□□□□□ -0.73
VMP1-217ENST00000593168 MBD3L1Q8WWY6 194 aa10.48□□□□□ -0.73
VMP1-217ENST00000593168 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
VMP1-217ENST00000593168 ACTR3CQ9C0K3 210 aaPredicted RBP10.48□□□□□ -0.73
VMP1-217ENST00000593168 GAR1Q9NY12 217 aaKnown RBP10.48□□□□□ -0.73
VMP1-217ENST00000593168 TRAV1-1A0A0B4J248 108 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 MFSD2BA6NFX1 497 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 NUDT19A8MXV4 375 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 F8W735 103 aaPredicted RBP10.47□□□□□ -0.73
VMP1-217ENST00000593168 HBE1P02100 147 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 TRGV3P03979 118 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 RNASE1P07998 156 aaKnown RBP10.47□□□□□ -0.73
VMP1-217ENST00000593168 ZNF90Q03938 601 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 ATP5G2Q06055 141 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 ZNF616Q08AN1 781 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 SHISA2Q6UWI4 295 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 ZNF502Q8TBZ5 544 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 RCC1LQ96I51 464 aaKnown RBP10.47□□□□□ -0.73
VMP1-217ENST00000593168 USMG5Q96IX5 58 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 MS4A10Q96PG2 267 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 PFDN2Q9UHV9 154 aa10.47□□□□□ -0.73
VMP1-217ENST00000593168 TRBV7-1A0A0A6YYK4 115 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 CTXND1A0A1B0GTU2 59 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 SEC14L6B5MCN3 397 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 TEX46H3BTG2 121 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 GNG7O60262 68 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 SCGB2A1O75556 95 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 IGKV1-17P01599 117 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms