RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 CORTO00230 105 aa13.06□□□□□ -0.32
CIRBP-238ENST00000592412 HPGDSO60760 199 aa13.06□□□□□ -0.32
CIRBP-238ENST00000592412 IFNA17P01571 189 aa13.06□□□□□ -0.32
CIRBP-238ENST00000592412 ZNF575Q86XF7 245 aa13.06□□□□□ -0.32
CIRBP-238ENST00000592412 BCL7BQ9BQE9 202 aa13.06□□□□□ -0.32
CIRBP-238ENST00000592412 SMIM31A0A1B0GVY4 71 aa13.05□□□□□ -0.32
CIRBP-238ENST00000592412 FAM90A26D6RGX4 464 aa13.05□□□□□ -0.32
CIRBP-238ENST00000592412 H3BMM0 161 aa13.05□□□□□ -0.32
CIRBP-238ENST00000592412 IGLC1P0CG04 106 aa13.05□□□□□ -0.32
CIRBP-238ENST00000592412 HOXA1P49639 335 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-238ENST00000592412 AKR1C2P52895 323 aa13.05□□□□□ -0.32
CIRBP-238ENST00000592412 SUB1P53999 127 aaKnown RBP eCLIP13.05□□□□□ -0.32
CIRBP-238ENST00000592412 Q6ZRM9 215 aa13.05□□□□□ -0.32
CIRBP-238ENST00000592412 LHFPL1Q86WI0 220 aa13.05□□□□□ -0.32
CIRBP-238ENST00000592412 DNAH5Q8TE73 4624 aa13.05□□□□□ -0.32
CIRBP-238ENST00000592412 IGLV2-18A0A075B6J9 118 aa13.04□□□□□ -0.32
CIRBP-238ENST00000592412 FAM25AB3EWG3 89 aa13.04□□□□□ -0.32
CIRBP-238ENST00000592412 FAM25CB3EWG5 89 aa13.04□□□□□ -0.32
CIRBP-238ENST00000592412 FAM25GB3EWG6 89 aa13.04□□□□□ -0.32
CIRBP-238ENST00000592412 ELK1P19419 428 aa13.04□□□□□ -0.32
CIRBP-238ENST00000592412 RCVRNP35243 200 aa13.04□□□□□ -0.32
CIRBP-238ENST00000592412 USF2Q15853 346 aaPredicted RBP13.04□□□□□ -0.32
CIRBP-238ENST00000592412 ZNF705AQ6ZN79 300 aaPredicted RBP13.04□□□□□ -0.32
CIRBP-238ENST00000592412 SNX29P2Q8IUI4 249 aa13.04□□□□□ -0.32
CIRBP-238ENST00000592412 SCPEP1Q9HB40 452 aa13.04□□□□□ -0.32
CIRBP-238ENST00000592412 ZNF705FA8MVS1 300 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-238ENST00000592412 HNRNPCP07910 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
CIRBP-238ENST00000592412 ZNF705DP0CH99 300 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-238ENST00000592412 ZNF705BP0CI00 300 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-238ENST00000592412 PIGPP57054 158 aa13.03□□□□□ -0.32
CIRBP-238ENST00000592412 PRSS54Q6PEW0 395 aa13.03□□□□□ -0.32
CIRBP-238ENST00000592412 ZNF486Q96H40 463 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-238ENST00000592412 NARS2Q96I59 477 aaKnown RBP13.03□□□□□ -0.32
CIRBP-238ENST00000592412 NEU1Q99519 415 aa13.03□□□□□ -0.32
CIRBP-238ENST00000592412 C1QTNF4Q9BXJ3 329 aa13.03□□□□□ -0.32
CIRBP-238ENST00000592412 C3orf85A0A1B0GTC6 90 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 H3BMQ9 156 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 PGAM2P15259 253 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 DEFB1P60022 68 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 DHODHQ02127 395 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 SP6Q3SY56 376 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 AARDQ4LEZ3 155 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 GDF5OSQ5U4N7 250 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 DYNC2LI1Q8TCX1 351 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 TMEM170AQ8WVE7 144 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 PDCD10Q9BUL8 212 aa13.02□□□□□ -0.33
CIRBP-238ENST00000592412 TRAV30A0A087WSZ9 112 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 CCDC160A6NGH7 325 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 RGS5O15539 181 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 NXPH3O95157 252 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 HLA-DRB4P13762 266 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 NPY1RP25929 384 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 EIF2B2P49770 351 aaKnown RBP13.01□□□□□ -0.33
CIRBP-238ENST00000592412 RND2P52198 227 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 YPEL3P61236 119 aaPredicted RBP13.01□□□□□ -0.33
CIRBP-238ENST00000592412 OR1S2Q8NGQ3 325 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 SEPSECSQ9HD40 501 aaKnown RBP13.01□□□□□ -0.33
CIRBP-238ENST00000592412 NRN1Q9NPD7 142 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 CCDC59Q9P031 241 aaKnown RBP13.01□□□□□ -0.33
CIRBP-238ENST00000592412 HLA-DRB4X5D2U9 266 aa13.01□□□□□ -0.33
CIRBP-238ENST00000592412 NACAE9PAV3 2078 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 BUB3O43684 328 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 IFNA10P01566 189 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 SPART-AS1P0CW21 52 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 UCP1P25874 307 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 OR10J1P30954 320 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 AP2S1P53680 142 aaPredicted RBP13□□□□□ -0.33
CIRBP-238ENST00000592412 NUTF2P61970 127 aaKnown RBP13□□□□□ -0.33
CIRBP-238ENST00000592412 Q8WTZ3 238 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 ENY2Q9NPA8 101 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 EXTL2Q9UBQ6 330 aa13□□□□□ -0.33
CIRBP-238ENST00000592412 SCGB2A1O75556 95 aa12.99□□□□□ -0.33
CIRBP-238ENST00000592412 IL4P05112 153 aa12.99□□□□□ -0.33
CIRBP-238ENST00000592412 EMP1P54849 157 aa12.99□□□□□ -0.33
CIRBP-238ENST00000592412 SNRPD3P62318 126 aaKnown RBP12.99□□□□□ -0.33
CIRBP-238ENST00000592412 TRIM16LQ309B1 348 aa12.99□□□□□ -0.33
CIRBP-238ENST00000592412 DKK2Q9UBU2 259 aa12.99□□□□□ -0.33
CIRBP-238ENST00000592412 KLK11Q9UBX7 282 aa12.99□□□□□ -0.33
CIRBP-238ENST00000592412 CTDSP2O14595 271 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 IFNA21P01568 189 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 CD3DP04234 171 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 HTR2BP41595 481 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 FXYD7P58549 80 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 SPCS3P61009 180 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 C2orf83Q53S99 150 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 RNASE12Q5GAN4 147 aaKnown RBP12.98□□□□□ -0.33
CIRBP-238ENST00000592412 SIGLEC15Q6ZMC9 328 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 UBE2DNLQ8IWF7 75 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 ZNF709Q8N972 641 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 OR4D10Q8NGI6 311 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 OR52E5Q8NH55 327 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 LHFPL5Q8TAF8 219 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 FAM210BQ96KR6 192 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 MIXL1Q9H2W2 232 aa12.98□□□□□ -0.33
CIRBP-238ENST00000592412 HERC1Q15751 4861 aa12.97□□□□□ -0.33
CIRBP-238ENST00000592412 RPS10-NUDT3A0A1W2PQS6 291 aa12.97□□□□□ -0.33
CIRBP-238ENST00000592412 ATG12O94817 140 aa12.97□□□□□ -0.33
CIRBP-238ENST00000592412 NKX2-1P43699 371 aaPredicted RBP12.97□□□□□ -0.33
CIRBP-238ENST00000592412 FAM222AQ5U5X8 452 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms