RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 BTCP35070 178 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 CMC4P56277 68 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-207ENST00000591519 ERHP84090 104 aaKnown RBP7.69□□□□□ -1.18
VPS4B-207ENST00000591519 TMEM128Q5BJH2 165 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 CEMP1Q6PRD7 247 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-207ENST00000591519 LYG2Q86SG7 212 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 FAM219AQ8IW50 185 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 LGI3Q8N145 548 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 UBAC2Q8NBM4 344 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 PINX1Q96BK5 328 aaKnown RBP7.69□□□□□ -1.18
VPS4B-207ENST00000591519 GALNT14Q96FL9 552 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 OR10C1Q96KK4 312 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 TXN2Q99757 166 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 MAP6D1Q9H9H5 199 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 BATF3Q9NR55 127 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-207ENST00000591519 SMPXQ9UHP9 88 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 TMEM56-RWDD3S4R434 201 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 NUPR2A6NF83 97 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 CEBPZOSA8MTT3 80 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 I3L2K1 104 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 NDUFB6O95139 128 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 SFT2D2O95562 160 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 SULT1A3P0DMM9 295 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 SULT1A4P0DMN0 295 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 SNCAP37840 140 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 SRPXP78539 464 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 EWSR1Q01844 656 aaKnown RBP eCLIP7.68□□□□□ -1.18
VPS4B-207ENST00000591519 Q56UQ5 140 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 STPG3Q8N7X2 389 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 DEDD2Q8WXF8 326 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 S100ZQ8WXG8 99 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 IL22RA2Q969J5 263 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 C20orf24Q9BUV8 137 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 UBQLN2Q9UHD9 624 aa7.68□□□□□ -1.18
VPS4B-207ENST00000591519 TRAV6A0A075B6T7 132 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 A0A0B4J2A0 478 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 CXorf65A6NEN9 183 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 CHEK1O14757 476 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 NUPL2O15504 423 aaKnown RBP7.67□□□□□ -1.18
VPS4B-207ENST00000591519 HOXB5P09067 269 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 MFAP4P55083 255 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 SPCS3P61009 180 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 RELQ04864 619 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-207ENST00000591519 ZNF846Q147U1 533 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 DEFB135Q30KP9 77 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 C4orf46Q504U0 113 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 FAM90A2PQ658T7 463 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 ZNF114Q8NC26 417 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 OR1S1Q8NH92 325 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 RNF2Q99496 336 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 C7orf50Q9BRJ6 194 aaKnown RBP7.67□□□□□ -1.18
VPS4B-207ENST00000591519 CCDC32Q9BV29 185 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 RHPN1-AS1Q9BWJ2 59 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 HEYLQ9NQ87 328 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-207ENST00000591519 SHPKQ9UHJ6 478 aa7.67□□□□□ -1.18
VPS4B-207ENST00000591519 IGHV3OR16-8A0A075B7F1 116 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 IGHV7-4-1A0A0J9YVY3 117 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 C9orf170A2RU37 121 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 LY6G6CO95867 125 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 MT-CO2P00403 227 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 OR4E1P0C645 316 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 RNASE2P10153 161 aaKnown RBP7.66□□□□□ -1.18
VPS4B-207ENST00000591519 UBE2MP61081 183 aaKnown RBP7.66□□□□□ -1.18
VPS4B-207ENST00000591519 SMCO1Q147U7 214 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 NMSQ5H8A3 153 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 TMEM217Q8N7C4 229 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 TMEM116Q8NCL8 245 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 WDR12Q9GZL7 423 aaKnown RBP7.66□□□□□ -1.18
VPS4B-207ENST00000591519 CSTL1Q9H114 145 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 C20orf85Q9H1P6 137 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 RBKSQ9H477 322 aa7.66□□□□□ -1.18
VPS4B-207ENST00000591519 KLK5Q9Y337 293 aaPredicted RBP7.66□□□□□ -1.18
VPS4B-207ENST00000591519 TRAV14DV4A0A0A6YYC5 116 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 INS-IGF2F8WCM5 200 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 ZNF207O43670 478 aaKnown RBP7.65□□□□□ -1.18
VPS4B-207ENST00000591519 ADAP1O75689 374 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 TCRBP04435 133 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 CD5P06127 495 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 IAPPP10997 89 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 SUB1P53999 127 aaKnown RBP eCLIP7.65□□□□□ -1.18
VPS4B-207ENST00000591519 GGNBP1Q5YKI7 109 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 PVRIGQ6DKI7 326 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 GATAD1Q8WUU5 269 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 NUDT15Q9NV35 164 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 TBC1D24Q9ULP9 559 aa7.65□□□□□ -1.18
VPS4B-207ENST00000591519 A0A1B0GU03 582 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 FAM240BA0A1B0GVZ2 78 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 MPTX1A8MV57 137 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 YIF1AO95070 293 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 IFNA10P01566 189 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 RPL35AP18077 110 aaKnown RBP7.64□□□□□ -1.19
VPS4B-207ENST00000591519 OPRK1P41145 380 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 IFITM3Q01628 133 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 DHRS2Q13268 280 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 PMS2P11Q13670 270 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 MZT2BQ6NZ67 158 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 LINC00299Q6ZSB3 139 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 APRG1Q8IVJ8 170 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 OR52E5Q8NH55 327 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms