RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 FAM110AQ9BQ89 295 aa13.15□□□□□ -0.3
H3F3B-207ENST00000589417 ZNF207O43670 478 aaKnown RBP13.14□□□□□ -0.31
H3F3B-207ENST00000589417 UPK1BO75841 260 aa13.14□□□□□ -0.31
H3F3B-207ENST00000589417 SCAF4O95104 1147 aaKnown RBP13.14□□□□□ -0.31
H3F3B-207ENST00000589417 IFNA21P01568 189 aa13.14□□□□□ -0.31
H3F3B-207ENST00000589417 BMI1P35226 326 aa13.14□□□□□ -0.31
H3F3B-207ENST00000589417 RND2P52198 227 aa13.14□□□□□ -0.31
H3F3B-207ENST00000589417 OR4D5Q8NGN0 318 aa13.14□□□□□ -0.31
H3F3B-207ENST00000589417 TM2D3Q9BRN9 247 aa13.14□□□□□ -0.31
H3F3B-207ENST00000589417 U3KQK5 164 aa13.14□□□□□ -0.31
H3F3B-207ENST00000589417 MPTX1A8MV57 137 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 OR11H12B2RN74 326 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 IFNA4P05014 189 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 CRYBB3P26998 211 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 OR10J1P30954 320 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 RAB11AP62491 216 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 RPP30P78346 268 aaKnown RBP13.13□□□□□ -0.31
H3F3B-207ENST00000589417 MZT2BQ6NZ67 158 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 OR52B4Q8NGK2 314 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 NPIPB3Q92617 1050 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 RNF2Q99496 336 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 TUBA4BQ9H853 241 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 NUDT15Q9NV35 164 aa13.13□□□□□ -0.31
H3F3B-207ENST00000589417 FAM240BA0A1B0GVZ2 78 aa13.12□□□□□ -0.31
H3F3B-207ENST00000589417 TIGITQ495A1 244 aa13.12□□□□□ -0.31
H3F3B-207ENST00000589417 Q8WTZ3 238 aa13.12□□□□□ -0.31
H3F3B-207ENST00000589417 SELENOKQ9Y6D0 94 aa13.12□□□□□ -0.31
H3F3B-207ENST00000589417 U3KQE9 123 aa13.12□□□□□ -0.31
H3F3B-207ENST00000589417 STAB2Q8WWQ8 2551 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 PRSS46E5RG02 174 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 H2AFB2P0C5Z0 115 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 IAPPP10997 89 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 NPPCP23582 126 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 NKX2-1P43699 371 aaPredicted RBP13.11□□□□□ -0.31
H3F3B-207ENST00000589417 IFITM3Q01628 133 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 GAMTQ14353 236 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 HAGHQ16775 308 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 DEFB125Q8N687 156 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 ZNF431Q8TF32 576 aaPredicted RBP13.11□□□□□ -0.31
H3F3B-207ENST00000589417 MAGT1Q9H0U3 335 aa13.11□□□□□ -0.31
H3F3B-207ENST00000589417 TRAV6A0A075B6T7 132 aa13.1□□□□□ -0.31
H3F3B-207ENST00000589417 A0A1W2PS18 150 aa13.1□□□□□ -0.31
H3F3B-207ENST00000589417 OR4C46A6NHA9 309 aa13.1□□□□□ -0.31
H3F3B-207ENST00000589417 WRBO00258 174 aa13.1□□□□□ -0.31
H3F3B-207ENST00000589417 TOMM40O96008 361 aa13.1□□□□□ -0.31
H3F3B-207ENST00000589417 APOHP02749 345 aaPredicted RBP13.1□□□□□ -0.31
H3F3B-207ENST00000589417 LILRB2Q8N423 598 aa13.1□□□□□ -0.31
H3F3B-207ENST00000589417 METTL26Q96S19 204 aa13.1□□□□□ -0.31
H3F3B-207ENST00000589417 TMEM231Q9H6L2 316 aa13.1□□□□□ -0.31
H3F3B-207ENST00000589417 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
H3F3B-207ENST00000589417 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
H3F3B-207ENST00000589417 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
H3F3B-207ENST00000589417 IL5P05113 134 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 RBMY1DP0C7P1 496 aaKnown RBP13.09□□□□□ -0.31
H3F3B-207ENST00000589417 RD3LP0DJH9 198 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 CMC4P56277 68 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-207ENST00000589417 TAS2R30P59541 319 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 POLR2GP62487 172 aaKnown RBP eCLIP13.09□□□□□ -0.31
H3F3B-207ENST00000589417 IAH1Q2TAA2 248 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-207ENST00000589417 ZBTB8BQ8NAP8 495 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-207ENST00000589417 ST8SIA2Q92186 375 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 SLC35E1Q96K37 410 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 SMIM8Q96KF7 97 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 WWC2-AS2Q96NR7 200 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 WFDC10AQ9H1F0 79 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 SRD5A3Q9H8P0 318 aa13.09□□□□□ -0.31
H3F3B-207ENST00000589417 IGKV1D-37A0A075B6S9 117 aa13.08□□□□□ -0.32
H3F3B-207ENST00000589417 IGHV3-49A0A0A0MS15 119 aa13.08□□□□□ -0.32
H3F3B-207ENST00000589417 THAP8Q8NA92 274 aa13.08□□□□□ -0.32
H3F3B-207ENST00000589417 STRAPQ9Y3F4 350 aaKnown RBP13.08□□□□□ -0.32
H3F3B-207ENST00000589417 PSG1P11464 419 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 PAX9P55771 341 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 ODF3L2Q3SX64 289 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 SPANXN5Q5MJ07 72 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 TCF24Q7RTU0 167 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 C12orf45Q8N5I9 185 aaPredicted RBP13.07□□□□□ -0.32
H3F3B-207ENST00000589417 RCHY1Q96PM5 261 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 RAB40CQ96S21 281 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 TRGV9Q99603 122 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 SPATA25Q9BR10 227 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 SEC22CQ9BRL7 303 aa13.07□□□□□ -0.32
H3F3B-207ENST00000589417 TENM3Q9P273 2699 aa13.06□□□□□ -0.32
H3F3B-207ENST00000589417 IGHV3OR16-13A0A075B7E8 117 aa13.06□□□□□ -0.32
H3F3B-207ENST00000589417 IGHV3-74A0A0B4J1X5 117 aa13.06□□□□□ -0.32
H3F3B-207ENST00000589417 PMS2P5A8MQ11 134 aa13.06□□□□□ -0.32
H3F3B-207ENST00000589417 DFFBO76075 338 aa13.06□□□□□ -0.32
H3F3B-207ENST00000589417 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
H3F3B-207ENST00000589417 OR51G1Q8NGK1 321 aa13.06□□□□□ -0.32
H3F3B-207ENST00000589417 NARS2Q96I59 477 aaKnown RBP13.06□□□□□ -0.32
H3F3B-207ENST00000589417 CITED4Q96RK1 184 aa13.06□□□□□ -0.32
H3F3B-207ENST00000589417 IGKV1OR2-108A0A075B7D4 117 aa13.05□□□□□ -0.32
H3F3B-207ENST00000589417 ZFP92A6NM28 416 aa13.05□□□□□ -0.32
H3F3B-207ENST00000589417 TSC22D2O75157 780 aa13.05□□□□□ -0.32
H3F3B-207ENST00000589417 IL4P05112 153 aa13.05□□□□□ -0.32
H3F3B-207ENST00000589417 FABP1P07148 127 aa13.05□□□□□ -0.32
H3F3B-207ENST00000589417 HNRNPCP07910 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
H3F3B-207ENST00000589417 USF2Q15853 346 aaPredicted RBP13.05□□□□□ -0.32
H3F3B-207ENST00000589417 TMEM14EPQ6UXP3 125 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms