RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 CLINT1Q14677 625 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 ZNF876PQ49A33 203 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 TMEM155Q4W5P6 130 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 C10orf99Q6UWK7 81 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 HEPN1Q6WQI6 88 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 LRRC75A-AS1Q8N1F1 130 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 STXBP6Q8NFX7 210 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 OR4A4PQ8NGN8 299 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 OR1S1Q8NH92 325 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 CXorf58Q96LI9 332 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 TBX15Q96SF7 602 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 RNF2Q99496 336 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 S1PR3Q99500 378 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 VPS25Q9BRG1 176 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 ATG101Q9BSB4 218 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 AGMATQ9BSE5 352 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 TMEM208Q9BTX3 173 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 CLEC7AQ9BXN2 247 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 ZNF436Q9C0F3 470 aaPredicted RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 VCX2Q9H322 139 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 GPR132Q9UNW8 380 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 IGKV3-7A0A075B6H7 116 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 IGHV3OR16-13A0A075B7E8 117 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 IGHV3-74A0A0B4J1X5 117 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 SMCO3A2RU48 225 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 C7orf66A4D0T2 115 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 SMIM1B2RUZ4 78 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 E7EUB6 86 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 GPR31O00270 319 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 SSSCA1O60232 199 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 FOXH1O75593 365 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 NMBP08949 121 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 MRPS10P82664 201 aaKnown RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 DHODHQ02127 395 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 TNXAQ16473 311 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 DEFB112Q30KQ8 113 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 TMEM128Q5BJH2 165 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 SPANXN5Q5MJ07 72 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 ZNF660Q6AZW8 331 aaPredicted RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 NOTCH2NLQ7Z3S9 236 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 H1FOOQ8IZA3 346 aaPredicted RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 RNASE8Q8TDE3 154 aaKnown RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 MOB3AQ96BX8 217 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 C18orf12Q96KH6 178 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 IGHV2-70DA0A0C4DH43 119 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 CEBPZOSA8MTT3 80 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 G3V318 75 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 RAB29O14966 203 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 HMGB3O15347 200 aaKnown RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 TGOLN2O43493 480 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 GSTZ1O43708 216 aaPredicted RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 GPR137BO60478 399 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 LY6G6DO95868 133 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 IGHV3-11P01762 117 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 FRMD6-AS1P0C7T7 363 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 CT45A6P0DMU7 189 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 CT45A5P0DMU8 189 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 CT45A7P0DMV0 189 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 IGHV4-31P0DP07 118 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 ANXA3P12429 323 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 F2RP25116 425 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 CFHR2P36980 270 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 TMEM267Q0VDI3 215 aaPredicted RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 HMGN3Q15651 99 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 SSX8Q7RTT4 187 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 H2BFWTQ7Z2G1 175 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 OR4P4Q8NGL7 312 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 OR13D1Q8NGV5 346 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 OR9G1Q8NH87 305 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 PPP1R1CQ8WVI7 109 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 DUX3Q96PT4 197 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 PHB2Q99623 299 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 TPPP3Q9BW30 176 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 NKX6-2Q9C056 277 aaPredicted RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 TET2Q6N021 2002 aaPredicted RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 IGHV3-49A0A0A0MS15 119 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 IGHV1-3A0A0C4DH29 117 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 A0A1B0GW15 77 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 G3V3Q6 166 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 BUB1B-PAK6H3BSN5 160 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 CTDSPLO15194 276 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 IGKV1-39P01597 117 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 CD74P04233 296 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 IGKV1D-39P04432 117 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 PRSS1P07477 247 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 OR9G9P0C7N8 305 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 METTL15P1P0C7V9 234 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 SPP1P10451 314 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 PVALBP20472 110 aaPredicted RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 S100GP29377 79 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 DUTP33316 252 aaKnown RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 MRGPRG-AS1Q2M3A8 158 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 HLA-DRB5Q30154 266 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 LYG2Q86SG7 212 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 KRTAP7-1Q8IUC3 87 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 MAPKAPK5-AS1Q8N8E1 139 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 LFNGQ8NES3 379 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 C15orf40Q8WUR7 153 aa2.56□□□□□ -2
ZNF540-207ENST00000589285 FLYWCH2Q96CP2 140 aaKnown RBP2.56□□□□□ -2
ZNF540-207ENST00000589285 FAM210BQ96KR6 192 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms