RNA–Protein interactions for RNA: ENST00000584052.5

RIOK3-208, Transcript of RIO kinase 3, human

TSL 2

Gene RIOK3, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK3-208	ENST00000584052	SPINK9	Q5DT21	86 aa		11.19	□□□□□ -0.62
RIOK3-208	ENST00000584052	LRTM2	Q8N967	370 aa		11.19	□□□□□ -0.62
RIOK3-208	ENST00000584052	FBXL17	Q9UF56	701 aa		11.19	□□□□□ -0.62
RIOK3-208	ENST00000584052	CACFD1	Q9UGQ2	172 aa		11.19	□□□□□ -0.62
RIOK3-208	ENST00000584052	HYDIN	Q4G0P3	5121 aa		11.19	□□□□□ -0.62
RIOK3-208	ENST00000584052	LINC00854	A0A1B0GVQ3	168 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	CHEK1	O14757	476 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	PLA2G10	O15496	165 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	SFT2D2	O95562	160 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	SULT1A3	P0DMM9	295 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	SULT1A4	P0DMN0	295 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	FCGR2B	P31994	310 aa	Predicted RBP	11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	C11orf45	Q8TAV5	145 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	TXN2	Q99757	166 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	GINS3	Q9BRX5	216 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052	MFF	Q9GZY8	342 aa		11.18	□□□□□ -0.62
RIOK3-208	ENST00000584052		I3L2K1	104 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	CORT	O00230	105 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	LYRM1	O43325	122 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	IGHV3-48	P01763	117 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	RNASE2	P10153	161 aa	Known RBP	11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	SNCA	P37840	140 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	SMCO1	Q147U7	214 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	ZNF124	Q15973	351 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	BSX	Q3C1V8	233 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	PVRIG	Q6DKI7	326 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	LYZL2	Q7Z4W2	148 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	OR11H2	Q8NH07	326 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	GATAD1	Q8WUU5	269 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	WDR12	Q9GZL7	423 aa	Known RBP	11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	ENY2	Q9NPA8	101 aa		11.17	□□□□□ -0.62
RIOK3-208	ENST00000584052	MT-CO2	P00403	227 aa		11.16	□□□□□ -0.62
RIOK3-208	ENST00000584052	CD5	P06127	495 aa		11.16	□□□□□ -0.62
RIOK3-208	ENST00000584052	TCF24	Q7RTU0	167 aa		11.16	□□□□□ -0.62
RIOK3-208	ENST00000584052	RPP25L	Q8N5L8	163 aa	Known RBP	11.16	□□□□□ -0.62
RIOK3-208	ENST00000584052	DUSP18	Q8NEJ0	188 aa		11.16	□□□□□ -0.62
RIOK3-208	ENST00000584052	FLVCR2	Q9UPI3	526 aa		11.16	□□□□□ -0.62
RIOK3-208	ENST00000584052		A0A1B0GU03	582 aa		11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052		F8W735	103 aa	Predicted RBP	11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052	DEDD	O75618	318 aa		11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052	SLC25A6	P12236	298 aa		11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052	NPBWR1	P48145	328 aa		11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052	SUB1	P53999	127 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052	NANOS2	P60321	138 aa	Known RBP	11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052	ZNF846	Q147U1	533 aa		11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052	HSPB7	Q9UBY9	170 aa		11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052	TMED3	Q9Y3Q3	217 aa		11.15	□□□□□ -0.62
RIOK3-208	ENST00000584052	C9orf170	A2RU37	121 aa		11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	CEBPZOS	A8MTT3	80 aa		11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	CA1	P00915	261 aa	Predicted RBP	11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	OR4E1	P0C645	316 aa		11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	HTR2B	P41595	481 aa		11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	LGALS9C	Q6DKI2	356 aa		11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	C20orf85	Q9H1P6	137 aa		11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	TMEM231	Q9H6L2	316 aa		11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	RABAC1	Q9UI14	185 aa		11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	ALMS1	Q8TCU4	4167 aa		11.14	□□□□□ -0.63
RIOK3-208	ENST00000584052	IGHV3-66	A0A0C4DH42	116 aa		11.13	□□□□□ -0.63
RIOK3-208	ENST00000584052	DEFB4A	O15263	64 aa		11.13	□□□□□ -0.63
RIOK3-208	ENST00000584052	PITX3	O75364	302 aa		11.13	□□□□□ -0.63
RIOK3-208	ENST00000584052	DHRS2	Q13268	280 aa		11.13	□□□□□ -0.63
RIOK3-208	ENST00000584052	STH	Q8IWL8	128 aa		11.13	□□□□□ -0.63
RIOK3-208	ENST00000584052	SLC24A4	Q8NFF2	622 aa		11.13	□□□□□ -0.63
RIOK3-208	ENST00000584052	OR1S1	Q8NH92	325 aa		11.13	□□□□□ -0.63
RIOK3-208	ENST00000584052	OR10C1	Q96KK4	312 aa		11.13	□□□□□ -0.63
RIOK3-208	ENST00000584052	HEYL	Q9NQ87	328 aa	Predicted RBP	11.13	□□□□□ -0.63
RIOK3-208	ENST00000584052	FAM90A26	D6RGX4	464 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	SCGB2A1	O75556	95 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	UPK1B	O75841	260 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	DFFB	O76075	338 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	NXPH3	O95157	252 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	TCRB	P04435	133 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	ANXA7	P20073	488 aa	Known RBP	11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	NPPC	P23582	126 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	DEFB131A	P59861	70 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	ASAH1	Q13510	395 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	C2orf83	Q53S99	150 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	LEMD1	Q68G75	181 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	TOMM20L	Q6UXN7	152 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	COQ8A	Q8NI60	647 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	C2CD4C	Q8TF44	421 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	NARS2	Q96I59	477 aa	Known RBP	11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	MS4A6A	Q9H2W1	248 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	TBC1D24	Q9ULP9	559 aa		11.12	□□□□□ -0.63
RIOK3-208	ENST00000584052	PLEC	Q15149	4684 aa	Known RBP	11.11	□□□□□ -0.63
RIOK3-208	ENST00000584052		A0A1W2PS18	150 aa		11.11	□□□□□ -0.63
RIOK3-208	ENST00000584052	C4orf46	Q504U0	113 aa		11.11	□□□□□ -0.63
RIOK3-208	ENST00000584052	ZNF600	Q6ZNG1	722 aa		11.11	□□□□□ -0.63
RIOK3-208	ENST00000584052	DTD1	Q8TEA8	209 aa		11.11	□□□□□ -0.63
RIOK3-208	ENST00000584052	ST8SIA2	Q92186	375 aa		11.11	□□□□□ -0.63
RIOK3-208	ENST00000584052	RBKS	Q9H477	322 aa		11.11	□□□□□ -0.63
RIOK3-208	ENST00000584052	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
RIOK3-208	ENST00000584052	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.1	□□□□□ -0.63
RIOK3-208	ENST00000584052	IGLL5	B9A064	214 aa		11.1	□□□□□ -0.63
RIOK3-208	ENST00000584052	HOXB5	P09067	269 aa		11.1	□□□□□ -0.63
RIOK3-208	ENST00000584052	NPY1R	P25929	384 aa		11.1	□□□□□ -0.63
RIOK3-208	ENST00000584052	OPRK1	P41145	380 aa		11.1	□□□□□ -0.63
RIOK3-208	ENST00000584052	GGNBP1	Q5YKI7	109 aa		11.1	□□□□□ -0.63
RIOK3-208	ENST00000584052	FAM90A2P	Q658T7	463 aa		11.1	□□□□□ -0.63
RIOK3-208	ENST00000584052	MZT2B	Q6NZ67	158 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms