RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 CBLN2Q8IUK8 224 aa8.12□□□□□ -1.11
TRAPPC8-211ENST00000582539 TTC28Q96AY4 2481 aa8.12□□□□□ -1.11
TRAPPC8-211ENST00000582539 PRSS46E5RG02 174 aa8.12□□□□□ -1.11
TRAPPC8-211ENST00000582539 SCO1O75880 301 aa8.12□□□□□ -1.11
TRAPPC8-211ENST00000582539 MMP23AO75900 390 aa8.12□□□□□ -1.11
TRAPPC8-211ENST00000582539 CX3CL1P78423 397 aa8.12□□□□□ -1.11
TRAPPC8-211ENST00000582539 PAX8Q06710 450 aa8.12□□□□□ -1.11
TRAPPC8-211ENST00000582539 MIR17HGQ75NE6 70 aa8.12□□□□□ -1.11
TRAPPC8-211ENST00000582539 MEX3AA1L020 520 aaKnown RBP8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 PGPA6NDG6 321 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 LINC01559Q495D7 138 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 AJUBAQ96IF1 538 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 ZNF586Q9NXT0 402 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 TSTD3H0UI37 97 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 NDUFA6P56556 154 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 LOXL1Q08397 574 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 SPRNQ5BIV9 151 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 ISOC2Q96AB3 205 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 MEGF9Q9H1U4 602 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 LYNX1G3V0Z9 82 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 LYNX1P0DP58 116 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 RPL35P42766 123 aaKnown RBP8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 ECSCRQ19T08 205 aa8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 PACRGQ96M98 296 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC8-211ENST00000582539 BRWD1-AS2P59051 145 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 CENPWQ5EE01 88 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 DCAF16Q9NXF7 216 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 SVILO95425 2214 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 SHANK1Q9Y566 2161 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 IL4P05112 153 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 SAA4P35542 130 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 SP5Q6BEB4 398 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 BAGE3Q86Y29 109 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 LINC01549A6NIU2 74 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 PROP1O75360 226 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 DUX4L9Q6RFH8 374 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 ASCL2Q99929 193 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 IZUMO1RA6ND01 250 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 TSPOP30536 169 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 WT1-ASQ06250 92 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 FOXE3Q13461 319 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 C9orf139Q6ZV77 190 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 GNB1LQ9BYB4 327 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 SAMD10Q9BYL1 202 aa8.1□□□□□ -1.11
TRAPPC8-211ENST00000582539 COLCA2A8K830 154 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 OVOL1O14753 267 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 COL8A1P27658 744 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 TMEM75Q8N9X5 138 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 SLC25A39Q9BZJ4 359 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 SRRM4A7MD48 611 aaKnown RBP8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 H3BRN7 92 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 FABP9Q0Z7S8 132 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 ZNF726P1Q15940 193 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 C5orf24Q7Z6I8 188 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 LENEPQ9Y5L5 61 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 RIF1Q5UIP0 2472 aaKnown RBP8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 PPP1R17O96001 155 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 RPL15P61313 204 aaKnown RBP8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 TMEM78Q5T7P6 136 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 TEX38Q6PEX7 206 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 LINC01551Q86U37 167 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 ZGRF1Q86YA3 2104 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 ZNF295-AS1Q8N0V1 137 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 TMEM170AQ8WVE7 144 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 Q9H3A6 140 aa8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 CHD3Q12873 2000 aaKnown RBP8.09□□□□□ -1.11
TRAPPC8-211ENST00000582539 GCGP01275 180 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 TRGV3P03979 118 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 ADCYAP1P18509 176 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 CRYBB3P26998 211 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 CDX1P47902 265 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 IQCJQ1A5X6 159 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 OR10W1Q8NGF6 305 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 VSIRQ9H7M9 311 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 URGCP-MRPS24S4R325 110 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 LMO4P61968 165 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 OR10J6PQ8NGY7 276 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 MBD6Q96DN6 1003 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 BPTFQ12830 3046 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 RBAKDNA6NC62 111 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 FAM157AC9JC47 383 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 IGLC1P0CG04 106 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 CRIP2P52943 208 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 RHOGP84095 191 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 BLNKQ8WV28 456 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 RPP21Q9H633 154 aaKnown RBP8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 TANC2Q9HCD6 1990 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 IGLV11-55A0A075B6I3 123 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 FCN1O00602 326 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 IGHV4-39P01824 125 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 SMUG1Q53HV7 270 aa8.08□□□□□ -1.12
TRAPPC8-211ENST00000582539 CENPVL3A0A0U1RRI6 287 aa8.07□□□□□ -1.12
TRAPPC8-211ENST00000582539 J3QKU1 62 aa8.07□□□□□ -1.12
TRAPPC8-211ENST00000582539 PSG1P11464 419 aa8.07□□□□□ -1.12
TRAPPC8-211ENST00000582539 CRISP2P16562 243 aa8.07□□□□□ -1.12
TRAPPC8-211ENST00000582539 ELOBQ15370 118 aa8.07□□□□□ -1.12
TRAPPC8-211ENST00000582539 TOMM20LQ6UXN7 152 aa8.07□□□□□ -1.12
TRAPPC8-211ENST00000582539 C19orf35Q6ZS72 473 aa8.07□□□□□ -1.12
TRAPPC8-211ENST00000582539 DPF1Q92782 380 aa8.07□□□□□ -1.12
TRAPPC8-211ENST00000582539 RPH3ALQ9UNE2 315 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms