RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 SLC35G3Q8N808 338 aa8.97□□□□□ -0.97
SS18-219ENST00000581570 OR6F1Q8NGZ6 308 aa8.97□□□□□ -0.97
SS18-219ENST00000581570 MRGPRFQ96AM1 343 aa8.97□□□□□ -0.97
SS18-219ENST00000581570 NRN1Q9NPD7 142 aa8.97□□□□□ -0.97
SS18-219ENST00000581570 GOLT1BQ9Y3E0 138 aa8.97□□□□□ -0.97
SS18-219ENST00000581570 YTHDF2Q9Y5A9 579 aaKnown RBP8.97□□□□□ -0.97
SS18-219ENST00000581570 LOC102723971A0A1B0GUV8 181 aa8.96□□□□□ -0.98
SS18-219ENST00000581570 INS-IGF2F8WCM5 200 aa8.96□□□□□ -0.98
SS18-219ENST00000581570 IZUMO4Q1ZYL8 232 aa8.96□□□□□ -0.98
SS18-219ENST00000581570 GDF5OSQ5U4N7 250 aa8.96□□□□□ -0.98
SS18-219ENST00000581570 TBC1D26Q86UD7 250 aa8.96□□□□□ -0.98
SS18-219ENST00000581570 OR5H2Q8NGV7 314 aa8.96□□□□□ -0.98
SS18-219ENST00000581570 Q8WTZ3 238 aa8.96□□□□□ -0.98
SS18-219ENST00000581570 SDC2P34741 201 aa8.95□□□□□ -0.98
SS18-219ENST00000581570 RPL5P46777 297 aaKnown RBP8.95□□□□□ -0.98
SS18-219ENST00000581570 AQP4P55087 323 aa8.95□□□□□ -0.98
SS18-219ENST00000581570 TAS2R46P59540 309 aa8.95□□□□□ -0.98
SS18-219ENST00000581570 DEFB1P60022 68 aa8.95□□□□□ -0.98
SS18-219ENST00000581570 KRTAP10-2P60368 255 aa8.95□□□□□ -0.98
SS18-219ENST00000581570 RRN3P1Q2M238 152 aa8.95□□□□□ -0.98
SS18-219ENST00000581570 IDNKQ5T6J7 187 aa8.95□□□□□ -0.98
SS18-219ENST00000581570 LPCAT3Q6P1A2 487 aa8.95□□□□□ -0.98
SS18-219ENST00000581570 SIGLEC15Q6ZMC9 328 aa8.95□□□□□ -0.98
SS18-219ENST00000581570 C7orf50Q9BRJ6 194 aaKnown RBP8.95□□□□□ -0.98
SS18-219ENST00000581570 RPS10-NUDT3A0A1W2PQS6 291 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 NUDT3O95989 172 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 CLEC2LP0C7M8 214 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 ETV6P41212 452 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 CCL18P55774 89 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 DHODHQ02127 395 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 MXD1Q05195 221 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 C1orf158Q8N1D5 194 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 ZNF709Q8N972 641 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 OR4B1Q8NGF8 309 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 OR1S2Q8NGQ3 325 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 LINC00052Q96N35 136 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 PDCD10Q9BUL8 212 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 SLC35B3Q9H1N7 401 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 ENY2Q9NPA8 101 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 SSR3Q9UNL2 185 aa8.94□□□□□ -0.98
SS18-219ENST00000581570 A0A0B4J293 547 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 EBAG9O00559 213 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 BUB3O43684 328 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 IGLC1P0CG04 106 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 NAT1P18440 290 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 ALDH3B2P48448 385 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 TAS2R20P59543 309 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 YPEL3P61236 119 aaPredicted RBP8.93□□□□□ -0.98
SS18-219ENST00000581570 USF2Q15853 346 aaPredicted RBP8.93□□□□□ -0.98
SS18-219ENST00000581570 FOXI2Q6ZQN5 318 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 CLUHP3Q96NS8 147 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 MAGT1Q9H0U3 335 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 SAV1Q9H4B6 383 aaPredicted RBP8.93□□□□□ -0.98
SS18-219ENST00000581570 ANAPC10Q9UM13 185 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 LINC00588Q9Y4M8 146 aa8.93□□□□□ -0.98
SS18-219ENST00000581570 GSTZ1O43708 216 aaPredicted RBP8.92□□□□□ -0.98
SS18-219ENST00000581570 IGKV1-5P01602 117 aa8.92□□□□□ -0.98
SS18-219ENST00000581570 IL4P05112 153 aa8.92□□□□□ -0.98
SS18-219ENST00000581570 OR10J1P30954 320 aa8.92□□□□□ -0.98
SS18-219ENST00000581570 ID1P41134 155 aa8.92□□□□□ -0.98
SS18-219ENST00000581570 TSPAN5P62079 268 aa8.92□□□□□ -0.98
SS18-219ENST00000581570 PSG9Q00887 426 aa8.92□□□□□ -0.98
SS18-219ENST00000581570 BLOC1S6Q9UL45 172 aa8.92□□□□□ -0.98
SS18-219ENST00000581570 F5H768 121 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
SS18-219ENST00000581570 PSMB9P28065 219 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 HLA-DMAP28067 261 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 HRH1P35367 487 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 RND2P52198 227 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 ZNF79Q15937 498 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 PRSS54Q6PEW0 395 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 LYSMD2Q8IV50 215 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 S100A16Q96FQ6 103 aaKnown RBP8.91□□□□□ -0.98
SS18-219ENST00000581570 Q9H8V8 135 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 SCPEP1Q9HB40 452 aa8.91□□□□□ -0.98
SS18-219ENST00000581570 LYRM9A8MSI8 78 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 M0QYG6 137 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 P0C879 139 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 DEFB130BP0DP73 79 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 DEFB130AP0DP74 79 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 SLC25A4P12235 298 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 BTF3P20290 206 aaKnown RBP8.9□□□□□ -0.98
SS18-219ENST00000581570 HSPA13P48723 471 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 RORCP51449 518 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 AKR1C2P52895 323 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 UCP3P55916 312 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 CLINT1Q14677 625 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 BSXQ3C1V8 233 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 SPATA31B1PQ5VZV4 182 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 COQ8AQ8NI60 647 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 TMEM208Q9BTX3 173 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 WDR12Q9GZL7 423 aaKnown RBP8.9□□□□□ -0.98
SS18-219ENST00000581570 KLK11Q9UBX7 282 aa8.9□□□□□ -0.98
SS18-219ENST00000581570 DMBT1Q9UGM3 2413 aaPredicted RBP8.89□□□□□ -0.99
SS18-219ENST00000581570 ATG12O94817 140 aa8.89□□□□□ -0.99
SS18-219ENST00000581570 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
SS18-219ENST00000581570 HTR2BP41595 481 aa8.89□□□□□ -0.99
SS18-219ENST00000581570 PSMB3P49720 205 aa8.89□□□□□ -0.99
SS18-219ENST00000581570 TTC32Q5I0X7 151 aa8.89□□□□□ -0.99
SS18-219ENST00000581570 FAM78BQ5VT40 261 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms