RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 OR52B4Q8NGK2 314 aa9.46□□□□□ -0.9
SNORD55-201ENST00000581525 ZNF431Q8TF32 576 aaPredicted RBP9.46□□□□□ -0.9
SNORD55-201ENST00000581525 SPAG8Q99932 426 aaPredicted RBP9.46□□□□□ -0.9
SNORD55-201ENST00000581525 NEURL2Q9BR09 285 aa9.46□□□□□ -0.9
SNORD55-201ENST00000581525 GINS3Q9BRX5 216 aa9.46□□□□□ -0.9
SNORD55-201ENST00000581525 NUDT15Q9NV35 164 aa9.46□□□□□ -0.9
SNORD55-201ENST00000581525 PUS1Q9Y606 427 aaKnown RBP eCLIP9.46□□□□□ -0.9
SNORD55-201ENST00000581525 SCGB2A1O75556 95 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 NKX2-1P43699 371 aaPredicted RBP9.45□□□□□ -0.9
SNORD55-201ENST00000581525 RND2P52198 227 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 TAS2R30P59541 319 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 RAB11AP62491 216 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 RPP30P78346 268 aaKnown RBP9.45□□□□□ -0.9
SNORD55-201ENST00000581525 IL15RAQ13261 267 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 SBSPONQ8IVN8 264 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 NPIPB3Q92617 1050 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 SMIM8Q96KF7 97 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 C20orf24Q9BUV8 137 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 RHPN1-AS1Q9BWJ2 59 aa9.45□□□□□ -0.9
SNORD55-201ENST00000581525 IGKV1D-37A0A075B6S9 117 aa9.44□□□□□ -0.9
SNORD55-201ENST00000581525 TRAV6A0A075B6T7 132 aa9.44□□□□□ -0.9
SNORD55-201ENST00000581525 PMS2P5A8MQ11 134 aa9.44□□□□□ -0.9
SNORD55-201ENST00000581525 IFNA4P05014 189 aa9.44□□□□□ -0.9
SNORD55-201ENST00000581525 OR10J1P30954 320 aa9.44□□□□□ -0.9
SNORD55-201ENST00000581525 TIGITQ495A1 244 aa9.44□□□□□ -0.9
SNORD55-201ENST00000581525 RBPMS2Q6ZRY4 209 aaKnown RBP9.44□□□□□ -0.9
SNORD55-201ENST00000581525 SLC16A13Q7RTY0 426 aa9.44□□□□□ -0.9
SNORD55-201ENST00000581525 ZBTB8BQ8NAP8 495 aaPredicted RBP9.44□□□□□ -0.9
SNORD55-201ENST00000581525 RNF2Q99496 336 aa9.44□□□□□ -0.9
SNORD55-201ENST00000581525 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
SNORD55-201ENST00000581525 IGHV3OR16-8A0A075B7F1 116 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 WRBO00258 174 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 ZNF207O43670 478 aaKnown RBP9.43□□□□□ -0.9
SNORD55-201ENST00000581525 YIF1AO95070 293 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 TOMM40O96008 361 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 APOHP02749 345 aaPredicted RBP9.43□□□□□ -0.9
SNORD55-201ENST00000581525 IAPPP10997 89 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 NPPCP23582 126 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 CD81P60033 236 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 POLR2GP62487 172 aaKnown RBP eCLIP9.43□□□□□ -0.9
SNORD55-201ENST00000581525 GUCA2BQ16661 112 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 IAH1Q2TAA2 248 aaPredicted RBP9.43□□□□□ -0.9
SNORD55-201ENST00000581525 LILRB2Q8N423 598 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 C12orf45Q8N5I9 185 aaPredicted RBP9.43□□□□□ -0.9
SNORD55-201ENST00000581525 THAP8Q8NA92 274 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 Q8WTZ3 238 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 SEC22CQ9BRL7 303 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 MARVELD1Q9BSK0 173 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 MAGT1Q9H0U3 335 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 C11orf1Q9H5F2 150 aa9.43□□□□□ -0.9
SNORD55-201ENST00000581525 IGKV1OR2-108A0A075B7D4 117 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 TRAV2A0A0B4J234 112 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 A0A1W2PS18 150 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 OR11H12B2RN74 326 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 BMI1P35226 326 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 TMEM14EPQ6UXP3 125 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 NRARPQ7Z6K4 114 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 ST8SIA2Q92186 375 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 RAB40CQ96S21 281 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 STRAPQ9Y3F4 350 aaKnown RBP9.42□□□□□ -0.9
SNORD55-201ENST00000581525 DNAH7Q8WXX0 4024 aa9.42□□□□□ -0.9
SNORD55-201ENST00000581525 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
SNORD55-201ENST00000581525 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
SNORD55-201ENST00000581525 SNRPGP15A8MWD9 76 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 FNDC10F2Z333 226 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 PRAF2O60831 178 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 TSC22D2O75157 780 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 MBPP02686 304 aaPredicted RBP9.41□□□□□ -0.9
SNORD55-201ENST00000581525 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
SNORD55-201ENST00000581525 RD3LP0DJH9 198 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 PSG1P11464 419 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 HAGHQ16775 308 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 DEFB125Q8N687 156 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 ACY3Q96HD9 319 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 TRGV9Q99603 122 aa9.41□□□□□ -0.9
SNORD55-201ENST00000581525 RCL1Q9Y2P8 373 aaKnown RBP9.41□□□□□ -0.9
SNORD55-201ENST00000581525 NBEAL2Q6ZNJ1 2754 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 C7orf66A4D0T2 115 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 OR4C46A6NHA9 309 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 CMC4P56277 68 aaPredicted RBP9.4□□□□□ -0.9
SNORD55-201ENST00000581525 ODF3L2Q3SX64 289 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 SPANXN5Q5MJ07 72 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 C16orf54Q6UWD8 224 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 OR51G1Q8NGK1 321 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 ENKURQ8TC29 256 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 SLC35E1Q96K37 410 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 C2orf50Q96LR7 162 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 CITED4Q96RK1 184 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 METTL26Q96S19 204 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 ASCL2Q99929 193 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 TMEM231Q9H6L2 316 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 TUBA4BQ9H853 241 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 PSENENQ9NZ42 101 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 SELENOKQ9Y6D0 94 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 U3KQK5 164 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 STAB2Q8WWQ8 2551 aa9.4□□□□□ -0.9
SNORD55-201ENST00000581525 INMT-MINDY4F8WBC2 141 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 BUB3O43684 328 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 DFFBO76075 338 aa9.39□□□□□ -0.91
SNORD55-201ENST00000581525 CFDP00746 253 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms