RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 SCAF4O95104 1147 aaKnown RBP10.84□□□□□ -0.67
MKS1-207ENST00000578789 IFNA21P01568 189 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 IAPPP10997 89 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 ID3Q02535 119 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 MZT2BQ6NZ67 158 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
MKS1-207ENST00000578789 SBSPONQ8IVN8 264 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 OR4D5Q8NGN0 318 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 ASCL2Q99929 193 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 TRAV6A0A075B6T7 132 aa10.83□□□□□ -0.68
MKS1-207ENST00000578789 FAM240BA0A1B0GVZ2 78 aa10.83□□□□□ -0.68
MKS1-207ENST00000578789 OR10J1P30954 320 aa10.83□□□□□ -0.68
MKS1-207ENST00000578789 GPX4P36969 197 aaPredicted RBP10.83□□□□□ -0.68
MKS1-207ENST00000578789 YPEL3P61236 119 aaPredicted RBP10.83□□□□□ -0.68
MKS1-207ENST00000578789 TIGITQ495A1 244 aa10.83□□□□□ -0.68
MKS1-207ENST00000578789 LAMTOR1Q6IAA8 161 aa10.83□□□□□ -0.68
MKS1-207ENST00000578789 RHPN1-AS1Q9BWJ2 59 aa10.83□□□□□ -0.68
MKS1-207ENST00000578789 MAGT1Q9H0U3 335 aa10.83□□□□□ -0.68
MKS1-207ENST00000578789 VSIRQ9H7M9 311 aa10.83□□□□□ -0.68
MKS1-207ENST00000578789 IFNA4P05014 189 aa10.82□□□□□ -0.68
MKS1-207ENST00000578789 BMI1P35226 326 aa10.82□□□□□ -0.68
MKS1-207ENST00000578789 RPP30P78346 268 aaKnown RBP10.82□□□□□ -0.68
MKS1-207ENST00000578789 IFITM3Q01628 133 aa10.82□□□□□ -0.68
MKS1-207ENST00000578789 ZNF431Q8TF32 576 aaPredicted RBP10.82□□□□□ -0.68
MKS1-207ENST00000578789 NPIPB3Q92617 1050 aa10.82□□□□□ -0.68
MKS1-207ENST00000578789 RNF2Q99496 336 aa10.82□□□□□ -0.68
MKS1-207ENST00000578789 IGHV3-49A0A0A0MS15 119 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 OR11H12B2RN74 326 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 PRSS46E5RG02 174 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 H2AFB2P0C5Z0 115 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
MKS1-207ENST00000578789 RAB11AP62491 216 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 IAH1Q2TAA2 248 aaPredicted RBP10.81□□□□□ -0.68
MKS1-207ENST00000578789 FAM90A2PQ658T7 463 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 LINC00322Q6ZN03 302 aaPredicted RBP10.81□□□□□ -0.68
MKS1-207ENST00000578789 ACY3Q96HD9 319 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 SEC22CQ9BRL7 303 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 WFDC10AQ9H1F0 79 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 U3KQK5 164 aa10.81□□□□□ -0.68
MKS1-207ENST00000578789 WRBO00258 174 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 TOMM40O96008 361 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 CD5P06127 495 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 CRYBB3P26998 211 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 POLR2GP62487 172 aaKnown RBP eCLIP10.8□□□□□ -0.68
MKS1-207ENST00000578789 GAMTQ14353 236 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 DEFB125Q8N687 156 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 ZBTB8BQ8NAP8 495 aaPredicted RBP10.8□□□□□ -0.68
MKS1-207ENST00000578789 ST8SIA2Q92186 375 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 SLC35E1Q96K37 410 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 METTL26Q96S19 204 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 FAM110AQ9BQ89 295 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 TM2D3Q9BRN9 247 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 TUBA4BQ9H853 241 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 SRD5A3Q9H8P0 318 aa10.8□□□□□ -0.68
MKS1-207ENST00000578789 HUWE1Q7Z6Z7 4374 aaKnown RBP10.79□□□□□ -0.68
MKS1-207ENST00000578789 IGKV1D-37A0A075B6S9 117 aa10.79□□□□□ -0.68
MKS1-207ENST00000578789 OR4C46A6NHA9 309 aa10.79□□□□□ -0.68
MKS1-207ENST00000578789 APOHP02749 345 aaPredicted RBP10.79□□□□□ -0.68
MKS1-207ENST00000578789 IL5P05113 134 aa10.79□□□□□ -0.68
MKS1-207ENST00000578789 SPANXN5Q5MJ07 72 aa10.79□□□□□ -0.68
MKS1-207ENST00000578789 ENKURQ8TC29 256 aa10.79□□□□□ -0.68
MKS1-207ENST00000578789 Q8WTZ3 238 aa10.79□□□□□ -0.68
MKS1-207ENST00000578789 TMEM231Q9H6L2 316 aa10.79□□□□□ -0.68
MKS1-207ENST00000578789 STRAPQ9Y3F4 350 aaKnown RBP10.79□□□□□ -0.68
MKS1-207ENST00000578789 IGHV3OR16-13A0A075B7E8 117 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 IGHV3-74A0A0B4J1X5 117 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 A0A1W2PS18 150 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 SSSCA1O60232 199 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 NPPCP23582 126 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 HAGHQ16775 308 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 ODF3L2Q3SX64 289 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 TCF24Q7RTU0 167 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 C12orf45Q8N5I9 185 aaPredicted RBP10.78□□□□□ -0.68
MKS1-207ENST00000578789 SMIM8Q96KF7 97 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 PAIP2BQ9ULR5 123 aaKnown RBP10.78□□□□□ -0.68
MKS1-207ENST00000578789 RCL1Q9Y2P8 373 aaKnown RBP10.78□□□□□ -0.68
MKS1-207ENST00000578789 U3KQE9 123 aa10.78□□□□□ -0.68
MKS1-207ENST00000578789 TRAV2A0A0B4J234 112 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 RBMY1BA6NDE4 496 aaKnown RBP10.77□□□□□ -0.69
MKS1-207ENST00000578789 RBMY1EA6NEQ0 496 aaKnown RBP10.77□□□□□ -0.69
MKS1-207ENST00000578789 H3BP45 60 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 CCSO14618 274 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 IL4P05112 153 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 HNRNPCP07910 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
MKS1-207ENST00000578789 RBMY1DP0C7P1 496 aaKnown RBP10.77□□□□□ -0.69
MKS1-207ENST00000578789 RD3LP0DJH9 198 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 PAX9P55771 341 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 TAS2R30P59541 319 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 USF2Q15853 346 aaPredicted RBP10.77□□□□□ -0.69
MKS1-207ENST00000578789 LILRB2Q8N423 598 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 THAP8Q8NA92 274 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 RCHY1Q96PM5 261 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 RAB40CQ96S21 281 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 TRGV9Q99603 122 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 ZMAT4Q9H898 229 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 PSENENQ9NZ42 101 aa10.77□□□□□ -0.69
MKS1-207ENST00000578789 IGHV3-66A0A0C4DH42 116 aa10.76□□□□□ -0.69
MKS1-207ENST00000578789 ZFP92A6NM28 416 aa10.76□□□□□ -0.69
MKS1-207ENST00000578789 PMS2P5A8MQ11 134 aa10.76□□□□□ -0.69
MKS1-207ENST00000578789 DFFBO76075 338 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms