RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 NDUFB4O95168 129 aa8.82□□□□□ -1
SKA2-204ENST00000578519 S100A9P06702 114 aaKnown RBP8.82□□□□□ -1
SKA2-204ENST00000578519 RAB5AP20339 215 aa8.82□□□□□ -1
SKA2-204ENST00000578519 GATA2P23769 480 aaPredicted RBP8.82□□□□□ -1
SKA2-204ENST00000578519 CD24P25063 80 aa8.82□□□□□ -1
SKA2-204ENST00000578519 AKR1C3P42330 323 aa8.82□□□□□ -1
SKA2-204ENST00000578519 ATP5G3P48201 142 aa8.82□□□□□ -1
SKA2-204ENST00000578519 MFAP2P55001 183 aa8.82□□□□□ -1
SKA2-204ENST00000578519 RPL23P62829 140 aaKnown RBP8.82□□□□□ -1
SKA2-204ENST00000578519 ZNF90Q03938 601 aa8.82□□□□□ -1
SKA2-204ENST00000578519 SPATA31B1PQ5VZV4 182 aa8.82□□□□□ -1
SKA2-204ENST00000578519 C16orf82Q7Z2V1 217 aa8.82□□□□□ -1
SKA2-204ENST00000578519 DYNAPQ8N1N2 210 aa8.82□□□□□ -1
SKA2-204ENST00000578519 SGMS2Q8NHU3 365 aa8.82□□□□□ -1
SKA2-204ENST00000578519 FAM110DQ8TAY7 271 aaPredicted RBP8.82□□□□□ -1
SKA2-204ENST00000578519 VN1R17PQ8TDU5 208 aa8.82□□□□□ -1
SKA2-204ENST00000578519 TMEM37Q8WXS4 190 aa8.82□□□□□ -1
SKA2-204ENST00000578519 HIST1H2BAQ96A08 127 aa8.82□□□□□ -1
SKA2-204ENST00000578519 IGLV11-55A0A075B6I3 123 aa8.81□□□□□ -1
SKA2-204ENST00000578519 PSMB11A5LHX3 300 aa8.81□□□□□ -1
SKA2-204ENST00000578519 HELTA6NFD8 242 aa8.81□□□□□ -1
SKA2-204ENST00000578519 TOMM40O96008 361 aa8.81□□□□□ -1
SKA2-204ENST00000578519 IGLC1P0CG04 106 aa8.81□□□□□ -1
SKA2-204ENST00000578519 APELAP0DMC3 54 aa8.81□□□□□ -1
SKA2-204ENST00000578519 SRP14P37108 136 aaKnown RBP8.81□□□□□ -1
SKA2-204ENST00000578519 TAS2R60P59551 318 aa8.81□□□□□ -1
SKA2-204ENST00000578519 TIGITQ495A1 244 aa8.81□□□□□ -1
SKA2-204ENST00000578519 FAM24BQ8N5W8 94 aa8.81□□□□□ -1
SKA2-204ENST00000578519 IMMP2LQ96T52 175 aa8.81□□□□□ -1
SKA2-204ENST00000578519 ATP6V0BQ99437 205 aa8.81□□□□□ -1
SKA2-204ENST00000578519 BIN3Q9NQY0 253 aa8.81□□□□□ -1
SKA2-204ENST00000578519 C21orf62Q9NYP8 219 aa8.81□□□□□ -1
SKA2-204ENST00000578519 DMXL2Q8TDJ6 3036 aa8.81□□□□□ -1
SKA2-204ENST00000578519 ABCA4P78363 2273 aa8.8□□□□□ -1
SKA2-204ENST00000578519 IGHV7-81A0A0B4J1V7 117 aa8.8□□□□□ -1
SKA2-204ENST00000578519 K7EIM0 57 aa8.8□□□□□ -1
SKA2-204ENST00000578519 IGHV3-48P01763 117 aa8.8□□□□□ -1
SKA2-204ENST00000578519 CRYBA1P05813 215 aa8.8□□□□□ -1
SKA2-204ENST00000578519 S100A6P06703 90 aa8.8□□□□□ -1
SKA2-204ENST00000578519 FCGR2BP31994 310 aaPredicted RBP8.8□□□□□ -1
SKA2-204ENST00000578519 CNN1P51911 297 aaKnown RBP8.8□□□□□ -1
SKA2-204ENST00000578519 LYZP61626 148 aa8.8□□□□□ -1
SKA2-204ENST00000578519 SUMO1P63165 101 aaKnown RBP8.8□□□□□ -1
SKA2-204ENST00000578519 SSBP2P81877 361 aaPredicted RBP8.8□□□□□ -1
SKA2-204ENST00000578519 Q56UQ5 140 aa8.8□□□□□ -1
SKA2-204ENST00000578519 UNQ5815/PRO19632Q6UWF5 114 aa8.8□□□□□ -1
SKA2-204ENST00000578519 C1QL4Q86Z23 238 aa8.8□□□□□ -1
SKA2-204ENST00000578519 TEX29Q8N6K0 151 aa8.8□□□□□ -1
SKA2-204ENST00000578519 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
SKA2-204ENST00000578519 SLC25A2Q9BXI2 301 aa8.8□□□□□ -1
SKA2-204ENST00000578519 TMEM14CQ9P0S9 112 aa8.8□□□□□ -1
SKA2-204ENST00000578519 YTHDF2Q9Y5A9 579 aaKnown RBP8.8□□□□□ -1
SKA2-204ENST00000578519 HIVEP3Q5T1R4 2406 aa8.8□□□□□ -1
SKA2-204ENST00000578519 IGHV3-21A0A0B4J1V1 117 aa8.79□□□□□ -1
SKA2-204ENST00000578519 TRAV40A0A0B4J280 105 aa8.79□□□□□ -1
SKA2-204ENST00000578519 LOC105371267A0A1B0GV96 52 aa8.79□□□□□ -1
SKA2-204ENST00000578519 PSG1P11464 419 aa8.79□□□□□ -1
SKA2-204ENST00000578519 RPS10P46783 165 aaKnown RBP8.79□□□□□ -1
SKA2-204ENST00000578519 GNG4P50150 75 aa8.79□□□□□ -1
SKA2-204ENST00000578519 RAB9AP51151 201 aa8.79□□□□□ -1
SKA2-204ENST00000578519 LOXL1Q08397 574 aaPredicted RBP8.79□□□□□ -1
SKA2-204ENST00000578519 KLK9Q2XQG4 91 aa8.79□□□□□ -1
SKA2-204ENST00000578519 FAM120AOSQ5T036 256 aa8.79□□□□□ -1
SKA2-204ENST00000578519 PATE2Q6UY27 113 aa8.79□□□□□ -1
SKA2-204ENST00000578519 BPIFA4PQ86YQ2 179 aa8.79□□□□□ -1
SKA2-204ENST00000578519 OR4F17Q8NGA8 305 aa8.79□□□□□ -1
SKA2-204ENST00000578519 ISOC2Q96AB3 205 aa8.79□□□□□ -1
SKA2-204ENST00000578519 FAM167A-AS1Q96KT0 104 aa8.79□□□□□ -1
SKA2-204ENST00000578519 FAM103A1Q9BTL3 118 aaKnown RBP8.79□□□□□ -1
SKA2-204ENST00000578519 CHRDL1Q9BU40 450 aa8.79□□□□□ -1
SKA2-204ENST00000578519 HIF1ANQ9NWT6 349 aa8.79□□□□□ -1
SKA2-204ENST00000578519 FBXL7Q9UJT9 491 aa8.79□□□□□ -1
SKA2-204ENST00000578519 KLK9Q9UKQ9 250 aa8.79□□□□□ -1
SKA2-204ENST00000578519 BSNQ9UPA5 3926 aa8.79□□□□□ -1
SKA2-204ENST00000578519 ATRXP46100 2492 aa8.78□□□□□ -1
SKA2-204ENST00000578519 ASPMQ8IZT6 3477 aa8.78□□□□□ -1
SKA2-204ENST00000578519 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
SKA2-204ENST00000578519 SCO2A0A1W2PP80 73 aa8.78□□□□□ -1
SKA2-204ENST00000578519 A1L4Q6 167 aa8.78□□□□□ -1
SKA2-204ENST00000578519 OR10J4P0C629 311 aa8.78□□□□□ -1
SKA2-204ENST00000578519 NBEAP1P0C6P0 100 aa8.78□□□□□ -1
SKA2-204ENST00000578519 RNF224P0DH78 156 aa8.78□□□□□ -1
SKA2-204ENST00000578519 HIST1H1EP10412 219 aaKnown RBP8.78□□□□□ -1
SKA2-204ENST00000578519 GALR1P47211 349 aa8.78□□□□□ -1
SKA2-204ENST00000578519 KIAA0141Q14154 515 aaPredicted RBP8.78□□□□□ -1
SKA2-204ENST00000578519 ELOBQ15370 118 aa8.78□□□□□ -1
SKA2-204ENST00000578519 DEFB113Q30KQ7 82 aa8.78□□□□□ -1
SKA2-204ENST00000578519 PRSS57Q6UWY2 283 aa8.78□□□□□ -1
SKA2-204ENST00000578519 LINC01551Q86U37 167 aa8.78□□□□□ -1
SKA2-204ENST00000578519 LYPD1Q8N2G4 141 aa8.78□□□□□ -1
SKA2-204ENST00000578519 C5orf56Q8N8D9 126 aa8.78□□□□□ -1
SKA2-204ENST00000578519 OR5T1Q8NG75 326 aa8.78□□□□□ -1
SKA2-204ENST00000578519 OR10G8Q8NGN5 311 aa8.78□□□□□ -1
SKA2-204ENST00000578519 EEF1AKMT3Q96AZ1 226 aa8.78□□□□□ -1
SKA2-204ENST00000578519 AJUBAQ96IF1 538 aa8.78□□□□□ -1
SKA2-204ENST00000578519 FAM210BQ96KR6 192 aa8.78□□□□□ -1
SKA2-204ENST00000578519 FANCD2OSQ96PS1 177 aa8.78□□□□□ -1
SKA2-204ENST00000578519 MRPL36Q9P0J6 103 aaKnown RBP8.78□□□□□ -1
SKA2-204ENST00000578519 MRPL27Q9P0M9 148 aaKnown RBP8.78□□□□□ -1
SKA2-204ENST00000578519 DCHS1Q96JQ0 3298 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms