RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 SLC25A39Q9BZJ4 359 aaPredicted RBP8.91□□□□□ -0.98
SEC22B-201ENST00000578049 A8MWP6 167 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 ITGB1BP1O14713 200 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 MMP23AO75900 390 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 C3orf79P0CE67 100 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 CNTFRP26992 372 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 ANAPC13Q9BS18 74 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 ANAPC10Q9UM13 185 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 FREM3P0C091 2139 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 OVOL1O14753 267 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 FAM57AQ8TBR7 257 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 DUX5Q96PT3 197 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 GFRA4Q9GZZ7 299 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 OOSP1A8MZH6 123 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 TMEM167AQ8TBQ9 72 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 A0A0G2JMZ2 1700 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 LRRC37A2A6NM11 1700 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 IGKV1D-33P01593 117 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 IGKV1-33P01594 117 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 TDGF1P3P51864 188 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 CRIPAKQ8N1N5 446 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 PLXNA1Q9UIW2 1896 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 TMEM238C9JI98 176 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 PYYP10082 97 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 ZNF664Q8N3J9 261 aa8.9□□□□□ -0.98
SEC22B-201ENST00000578049 MTCL1Q9Y4B5 1905 aaKnown RBP8.9□□□□□ -0.99
SEC22B-201ENST00000578049 TMPRSS3P57727 454 aa8.9□□□□□ -0.99
SEC22B-201ENST00000578049 MST1LQ2TV78 715 aa8.9□□□□□ -0.99
SEC22B-201ENST00000578049 VKORC1Q9BQB6 163 aa8.9□□□□□ -0.99
SEC22B-201ENST00000578049 TCRAP04437 139 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 DEPPQ9NTK1 212 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 GNG5P63218 68 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 OR13C6PQ8NH95 151 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 RALGAPA1Q6GYQ0 2036 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 CELA3AP09093 270 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 C17orf82Q86X59 251 aaPredicted RBP8.89□□□□□ -0.99
SEC22B-201ENST00000578049 CHTOPQ9Y3Y2 248 aaKnown RBP8.89□□□□□ -0.99
SEC22B-201ENST00000578049 ZNF815PA8K554 130 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 ZNHIT1O43257 154 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 NDUFA3O95167 84 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 CT83Q5H943 113 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 SPANXDQ9BXN6 97 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 MYOFQ9NZM1 2061 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 SYS1-DBNDD2H3BUS1 97 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 GAGE2BQ13066 116 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 GAGE2EQ4V326 116 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 KLF17Q5JT82 389 aaPredicted RBP8.89□□□□□ -0.99
SEC22B-201ENST00000578049 FAM71F2Q6NXP2 309 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 SPSB3Q6PJ21 355 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 GAGE2DQ9UEU5 116 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 SBF2Q86WG5 1849 aa8.89□□□□□ -0.99
SEC22B-201ENST00000578049 PFN1P07737 140 aaKnown RBP8.89□□□□□ -0.99
SEC22B-201ENST00000578049 PNRC2Q9NPJ4 139 aaKnown RBP8.89□□□□□ -0.99
SEC22B-201ENST00000578049 TMEM256Q8N2U0 113 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 ZDBF2Q9HCK1 2354 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 CFHR1Q03591 330 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 BRCA1P38398 1863 aaKnown RBP8.88□□□□□ -0.99
SEC22B-201ENST00000578049 LAGE3Q14657 143 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 ATXN8Q156A1 80 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 PLEKHB2Q96CS7 222 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 IGKV3-15P01624 115 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 SIPA1L1O43166 1804 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 SDK2Q58EX2 2172 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 LOC285556D6RIA3 1793 aa8.88□□□□□ -0.99
SEC22B-201ENST00000578049 AKAP6Q13023 2319 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 FDCSPQ8NFU4 85 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 SRSF8Q9BRL6 282 aaKnown RBP8.87□□□□□ -0.99
SEC22B-201ENST00000578049 ERG28Q9UKR5 140 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 A0A1B0GWJ7 208 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 MGST2Q99735 147 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 SCN2AQ99250 2005 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 IGKV1-27A0A075B6S5 117 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 TRBV7-9A0A0J9YWB2 115 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 MORN3Q6PF18 240 aaPredicted RBP8.87□□□□□ -0.99
SEC22B-201ENST00000578049 TDRD6O60522 2096 aaKnown RBP8.87□□□□□ -0.99
SEC22B-201ENST00000578049 ZFAND6Q6FIF0 208 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 KIR3DL3Q8N743 410 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 TRGV11A0A075B6L2 103 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 BCL6BQ8N143 479 aaPredicted RBP8.87□□□□□ -0.99
SEC22B-201ENST00000578049 EFNA2O43921 213 aa8.87□□□□□ -0.99
SEC22B-201ENST00000578049 SCN8AQ9UQD0 1980 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 TRAV8-4A0A0B4J246 113 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 GFRA3O60609 400 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 IGHV2-5P01817 119 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 PAX2Q02962 417 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 DLX4Q92988 240 aaPredicted RBP8.86□□□□□ -0.99
SEC22B-201ENST00000578049 PSME4Q14997 1843 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 A0A0G2JMM0 328 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 A0A1W2PPB8 328 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 KIR3DP1A8MWS1 328 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 IGHV2-70P01814 119 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 RSPO4Q2I0M5 234 aaPredicted RBP8.86□□□□□ -0.99
SEC22B-201ENST00000578049 ZNF492Q9P255 531 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 MPV17L2Q567V2 206 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 COX11Q9Y6N1 276 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 PDCD11Q14690 1871 aaKnown RBP8.86□□□□□ -0.99
SEC22B-201ENST00000578049 IGHV3-35A0A0C4DH35 117 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 SEPSECSQ9HD40 501 aaKnown RBP8.86□□□□□ -0.99
SEC22B-201ENST00000578049 PDE6HQ13956 83 aa8.86□□□□□ -0.99
SEC22B-201ENST00000578049 TOMM40O96008 361 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms