RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 GCSAMQ8N6F7 178 aa12.52□□□□□ -0.4
SMG6-207ENST00000570756 CT45A3Q8NHU0 189 aa12.52□□□□□ -0.4
SMG6-207ENST00000570756 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.41
SMG6-207ENST00000570756 MEOX1P50221 254 aa12.52□□□□□ -0.41
SMG6-207ENST00000570756 SEC11AP67812 179 aa12.52□□□□□ -0.41
SMG6-207ENST00000570756 H1FXQ92522 213 aaKnown RBP12.52□□□□□ -0.41
SMG6-207ENST00000570756 KLF13Q9Y2Y9 288 aaPredicted RBP12.52□□□□□ -0.41
SMG6-207ENST00000570756 A0A087X0K7 114 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 TRAV8-6A0A0B4J262 113 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 TEX50A0A1B0GTY4 177 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 SRRM5B3KS81 715 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 DLL1O00548 723 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 IGLC1P0CG04 106 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 TCF24Q7RTU0 167 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 LEAP2Q969E1 77 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 NDFIP1Q9BT67 221 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 C7orf71A4D174 169 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 KLRC4-KLRK1H3BQV0 150 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 FABP6P51161 128 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 LINC00696Q6ZRV3 163 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 GTF2H5Q6ZYL4 71 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 GPR82Q96P67 336 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 MEGF9Q9H1U4 602 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 ZNF835Q9Y2P0 537 aa12.51□□□□□ -0.41
SMG6-207ENST00000570756 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 MLANAQ16655 118 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 BPIFA4PQ86YQ2 179 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 GFRA4Q9GZZ7 299 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 FZR1Q9UM11 496 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 CHEK1O14757 476 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 IGKV3-15P01624 115 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 P01737 135 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 COX8AP10176 69 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 ZNF841Q6ZN19 808 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 RBPMS2Q6ZRY4 209 aaKnown RBP12.5□□□□□ -0.41
SMG6-207ENST00000570756 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 STXBP6Q8NFX7 210 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 FXYD5Q96DB9 178 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 EPDR1Q9UM22 224 aa12.5□□□□□ -0.41
SMG6-207ENST00000570756 TMEM238C9JI98 176 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 ERHP84090 104 aaKnown RBP12.49□□□□□ -0.41
SMG6-207ENST00000570756 RNFT1Q5M7Z0 435 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 PEAR1Q5VY43 1037 aaPredicted RBP12.49□□□□□ -0.41
SMG6-207ENST00000570756 ZNRF1Q8ND25 227 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 AP1S3Q96PC3 154 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 PRSS22Q9GZN4 317 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 KLF12Q9Y4X4 402 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 LOC102724200A0A096LPH7 203 aaPredicted RBP12.49□□□□□ -0.41
SMG6-207ENST00000570756 KBTBD11-OT1A0A1B0GTJ5 212 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 SLC25A5P05141 298 aaKnown RBP12.49□□□□□ -0.41
SMG6-207ENST00000570756 CGB3P0DN86 165 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 CGB7P0DN87 165 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 HTR1DP28221 377 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 GNG5P63218 68 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 C17orf58Q2M2W7 97 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 LINC01545Q5VT33 79 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 ZNF430Q9H8G1 570 aaPredicted RBP12.49□□□□□ -0.41
SMG6-207ENST00000570756 ZNF492Q9P255 531 aa12.49□□□□□ -0.41
SMG6-207ENST00000570756 MYCNOSP40205 109 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 ARF6P62330 175 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 OR2Z1Q8NG97 314 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
SMG6-207ENST00000570756 DEFB127Q9H1M4 99 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 FRYQ5TBA9 3013 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 TRGV5A0A0B4J1U4 118 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 FAM231BA6NCW3 169 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 H0Y8G0 127 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 APOA2P02652 100 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 MBNL2Q5VZF2 373 aaKnown RBP12.48□□□□□ -0.41
SMG6-207ENST00000570756 Q6ZT83 130 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 GTSF1Q8WW33 167 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 MLST8Q9BVC4 326 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 TNCP24821 2201 aa12.48□□□□□ -0.41
SMG6-207ENST00000570756 IGHV3OR15-7A0A075B7D8 119 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 S100A7P31151 101 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 CFHR2P36980 270 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 TMEM97Q5BJF2 176 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 UTF1Q5T230 341 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 FMC1Q96HJ9 113 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 TCRBV4S1A1TA0A5B7 111 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 A6NDN8 102 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 AGFG2O95081 481 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 TMEM177Q53S58 311 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 RBMXL3Q8N7X1 1067 aaKnown RBP12.47□□□□□ -0.41
SMG6-207ENST00000570756 FER1L6-AS1Q8NA97 138 aa12.47□□□□□ -0.41
SMG6-207ENST00000570756 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.46□□□□□ -0.41
SMG6-207ENST00000570756 IGKV1-16P04430 117 aa12.46□□□□□ -0.41
SMG6-207ENST00000570756 SAA1P0DJI8 122 aaPredicted RBP12.46□□□□□ -0.41
SMG6-207ENST00000570756 CD24P25063 80 aa12.46□□□□□ -0.41
SMG6-207ENST00000570756 ZNF137PP52743 207 aa12.46□□□□□ -0.41
SMG6-207ENST00000570756 PRR31Q5SQ13 230 aa12.46□□□□□ -0.41
SMG6-207ENST00000570756 VHLLQ6RSH7 139 aa12.46□□□□□ -0.41
SMG6-207ENST00000570756 C2orf91Q6ZV80 131 aa12.46□□□□□ -0.41
SMG6-207ENST00000570756 OR10W1Q8NGF6 305 aa12.46□□□□□ -0.41
SMG6-207ENST00000570756 SPRR3Q9UBC9 169 aa12.46□□□□□ -0.41
SMG6-207ENST00000570756 C19orf71A6NCJ1 209 aa12.46□□□□□ -0.42
SMG6-207ENST00000570756 PGPA6NDG6 321 aa12.46□□□□□ -0.42
SMG6-207ENST00000570756 MOSP00540 346 aa12.46□□□□□ -0.42
SMG6-207ENST00000570756 PLA2G2CQ5R387 149 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms