RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 RNASEH2CQ8TDP1 164 aaKnown RBP6.95□□□□□ -1.3
CAPN3-219ENST00000569136 DYNLRB2Q8TF09 96 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 SDHCQ99643 169 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-219ENST00000569136 CCDC32Q9BV29 185 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 DAZ1Q9NQZ3 744 aaKnown RBP6.95□□□□□ -1.3
CAPN3-219ENST00000569136 TMED3Q9Y3Q3 217 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 TRAV30A0A087WSZ9 112 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 IGHV3-21A0A0B4J1V1 117 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 C15orf62A8K5M9 175 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 ZNF785A8K8V0 405 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 FAM90A26D6RGX4 464 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 GNG7O60262 68 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 MED6O75586 246 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 CD5P06127 495 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 RNASE2P10153 161 aaKnown RBP6.94□□□□□ -1.3
CAPN3-219ENST00000569136 SLC25A4P12235 298 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 IL7P13232 177 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 RPP30P78346 268 aaKnown RBP6.94□□□□□ -1.3
CAPN3-219ENST00000569136 TNFRSF9Q07011 255 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 BSXQ3C1V8 233 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 CD300EQ496F6 205 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-219ENST00000569136 C2orf83Q53S99 150 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 SPINK9Q5DT21 86 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 LAMTOR1Q6IAA8 161 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 RBPMS2Q6ZRY4 209 aaKnown RBP6.94□□□□□ -1.3
CAPN3-219ENST00000569136 UBAC2Q8NBM4 344 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 OR4X1Q8NH49 305 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 OR1S1Q8NH92 325 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 PINX1Q96BK5 328 aaKnown RBP6.94□□□□□ -1.3
CAPN3-219ENST00000569136 FAM210AQ96ND0 272 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 C1orf43Q9BWL3 253 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 HSPB7Q9UBY9 170 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 SLC45A2Q9UMX9 530 aa6.94□□□□□ -1.3
CAPN3-219ENST00000569136 LINC00854A0A1B0GVQ3 168 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 TMEM213A2RRL7 107 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 PITX3O75364 302 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 YIF1AO95070 293 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 TMEM50AO95807 157 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 IFNA21P01568 189 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 GCSHP23434 173 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 BMI1P35226 326 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 PPP1R1AQ13522 171 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 ADAMTSL5Q6ZMM2 481 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 COQ8AQ8NI60 647 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 TMEM190Q8WZ59 177 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 CIB3Q96Q77 187 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-219ENST00000569136 CHRDL1Q9BU40 450 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 C20orf24Q9BUV8 137 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 TUBA4BQ9H853 241 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 ZC4H2Q9NQZ6 224 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 FAM30AQ9NZY2 134 aa6.93□□□□□ -1.3
CAPN3-219ENST00000569136 TRAV14DV4A0A0A6YYC5 116 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 IGHV3-35A0A0C4DH35 117 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 GAGE12BA1L429 117 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 C9orf170A2RU37 121 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 LYRM1O43325 122 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 CLN5O75503 358 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 IFNA10P01566 189 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 GPX4P36969 197 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-219ENST00000569136 OPRK1P41145 380 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 CMC4P56277 68 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-219ENST00000569136 GUCA2BQ16661 112 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 MZT2BQ6NZ67 158 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 SLC16A13Q7RTY0 426 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 TMEM116Q8NCL8 245 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 SLC24A4Q8NFF2 622 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 CACNG8Q8WXS5 425 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 OR10C1Q96KK4 312 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 GINS3Q9BRX5 216 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 SMPXQ9UHP9 88 aa6.92□□□□□ -1.3
CAPN3-219ENST00000569136 A0A1W2PS18 150 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 IZUMO1RA6ND01 250 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 PLA2G10O15496 165 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 IFNA4P05014 189 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 OR4E1P0C645 316 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 NPY1RP25929 384 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 C4orf46Q504U0 113 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 ZNF600Q6ZNG1 722 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 LYG2Q86SG7 212 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 HAPLN4Q86UW8 402 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 DTD1Q8TEA8 209 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 RBKSQ9H477 322 aa6.91□□□□□ -1.3
CAPN3-219ENST00000569136 TSPAN4O14817 238 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 IGHV3-48P01763 117 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 TCRBP04435 133 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 HOXB5P09067 269 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 FRMD6-AS1P0C7T7 363 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 IGHV4-30-4P0DP06 118 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 NPPCP23582 126 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 YPEL3P61236 119 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-219ENST00000569136 RAB11AP62491 216 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 PAFAH1B2P68402 229 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 DHRS2Q13268 280 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 GGNBP1Q5YKI7 109 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 IGFL4Q6B9Z1 124 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 PRSS54Q6PEW0 395 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 TOMM20LQ6UXN7 152 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 OR1S2Q8NGQ3 325 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms