RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 TMEM8BA6NDV4 472 aa17.49■□□□□ 0.39
SPSB3-208ENST00000566339 FAM181BA6NEQ2 426 aa17.49■□□□□ 0.39
SPSB3-208ENST00000566339 GATA2P23769 480 aaPredicted RBP17.49■□□□□ 0.39
SPSB3-208ENST00000566339 TSPOP30536 169 aa17.49■□□□□ 0.39
SPSB3-208ENST00000566339 TNFAIP6P98066 277 aaPredicted RBP17.49■□□□□ 0.39
SPSB3-208ENST00000566339 ETFRF1Q6IPR1 90 aa17.49■□□□□ 0.39
SPSB3-208ENST00000566339 MOB3BQ86TA1 216 aa17.49■□□□□ 0.39
SPSB3-208ENST00000566339 ZNF355PQ9NSJ1 428 aa17.49■□□□□ 0.39
SPSB3-208ENST00000566339 ZNF492Q9P255 531 aa17.49■□□□□ 0.39
SPSB3-208ENST00000566339 NKX6-3A6NJ46 265 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 TOMM40O96008 361 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 IGKV1-16P04430 117 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 REG1BP48304 166 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 GNG10P50151 68 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 UBE2G1P62253 170 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 ZNF596Q8TC21 504 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 SNRNP40Q96DI7 357 aaKnown RBP17.48■□□□□ 0.39
SPSB3-208ENST00000566339 HARBI1Q96MB7 349 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 FAM231BA6NCW3 169 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 H0YJW9 148 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 M0R1B8 84 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 SLC35B1P78383 322 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 LINC00311Q8N616 119 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 FDCSPQ8NFU4 85 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 CHCHD1Q96BP2 118 aaKnown RBP17.48■□□□□ 0.39
SPSB3-208ENST00000566339 FXYD5Q96DB9 178 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 GFRA4Q9GZZ7 299 aa17.48■□□□□ 0.39
SPSB3-208ENST00000566339 NBEAQ8NFP9 2946 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 PKD1L2Q7Z442 2459 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 PAX2Q02962 417 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 TNXAQ16473 311 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 SPRNQ5BIV9 151 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 PVRIGQ6DKI7 326 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 STPG4Q8N801 248 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 NHLRC2Q8NBF2 726 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 OR4C13Q8NGP0 309 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 PERPQ96FX8 193 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 TNFRSF19Q9NS68 423 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 TANC2Q9HCD6 1990 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 DSCAML1Q8TD84 2053 aa17.47■□□□□ 0.39
SPSB3-208ENST00000566339 M0R2Z0 102 aa17.46■□□□□ 0.39
SPSB3-208ENST00000566339 CRXO43186 299 aaPredicted RBP17.46■□□□□ 0.39
SPSB3-208ENST00000566339 FSTL3O95633 263 aa17.46■□□□□ 0.39
SPSB3-208ENST00000566339 NTF3P20783 257 aa17.46■□□□□ 0.39
SPSB3-208ENST00000566339 FLYWCH2Q96CP2 140 aaKnown RBP17.46■□□□□ 0.39
SPSB3-208ENST00000566339 EPDR1Q9UM22 224 aa17.46■□□□□ 0.39
SPSB3-208ENST00000566339 IGHV1-46P01743 117 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 CCL11P51671 97 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 ZCCHC24Q8N2G6 241 aaKnown RBP17.45■□□□□ 0.38
SPSB3-208ENST00000566339 OR10X1Q8NGY0 326 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 FAM168AQ92567 244 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 GPR82Q96P67 336 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 CHD6Q8TD26 2715 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 IGHV1-69-2A0A0G2JMI3 117 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 A8MWL6 223 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 NKX2-8O15522 239 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 NDUFB8O95169 186 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 FAM19A2Q8N3H0 131 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 TMEM186Q96B77 213 aa17.45■□□□□ 0.38
SPSB3-208ENST00000566339 URB1O60287 2271 aaKnown RBP17.45■□□□□ 0.38
SPSB3-208ENST00000566339 TRAV5A0A0B4J249 113 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 C2orf70A6NJV1 201 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 HBBP68871 147 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 PATE2Q6UY27 113 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 ZNF738Q8NE65 137 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 OR2T6Q8NHC8 308 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 FMC1Q96HJ9 113 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 CCL13Q99616 98 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 MRPL20Q9BYC9 149 aaKnown RBP17.44■□□□□ 0.38
SPSB3-208ENST00000566339 PRSS22Q9GZN4 317 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 ST20Q9HBF5 79 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 ASCL3Q9NQ33 180 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 LOC400499M0QZD8 3231 aa17.44■□□□□ 0.38
SPSB3-208ENST00000566339 IGKV1D-37A0A075B6S9 117 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 OR5AL1P0C617 328 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 MLANAQ16655 118 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 GDF5OSQ5U4N7 250 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 MORN5Q5VZ52 161 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 SEM1Q6ZVN7 128 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 NUP37Q8NFH4 326 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 OR10W1Q8NGF6 305 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 TRGV9Q99603 122 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 TMEM70Q9BUB7 260 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 MLST8Q9BVC4 326 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 SSUH2Q9Y2M2 353 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 HIGD1CA8MV81 97 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 CRYGCP07315 174 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 TFPI2P48307 235 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 RBMXL3Q8N7X1 1067 aaKnown RBP17.43■□□□□ 0.38
SPSB3-208ENST00000566339 SSBP3Q9BWW4 388 aaPredicted RBP17.43■□□□□ 0.38
SPSB3-208ENST00000566339 RPP21Q9H633 154 aaKnown RBP17.43■□□□□ 0.38
SPSB3-208ENST00000566339 RAXQ9Y2V3 346 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 ITPR1Q14643 2758 aa17.43■□□□□ 0.38
SPSB3-208ENST00000566339 CA1P00915 261 aaPredicted RBP17.42■□□□□ 0.38
SPSB3-208ENST00000566339 TNFRSF1AP19438 455 aa17.42■□□□□ 0.38
SPSB3-208ENST00000566339 ZNF137PP52743 207 aa17.42■□□□□ 0.38
SPSB3-208ENST00000566339 PLP1P60201 277 aa17.42■□□□□ 0.38
SPSB3-208ENST00000566339 SRSF6Q13247 344 aaKnown RBP17.42■□□□□ 0.38
SPSB3-208ENST00000566339 FAM201AQ5SY85 155 aa17.42■□□□□ 0.38
SPSB3-208ENST00000566339 EBLN2Q6P2I7 272 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms